|   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | N | V | K | D | L | R | V | T | F | S | T | P | D | G | D | V | T | A | V | N | D | L | N | F | S | L | R | A | G | E | T | L | G | I | V | G | E | S | G | S | G | K | S | Q | T | A | F | A | L | M | G | L | L | A | A | N | G | R | I | G | G | S | A | T | F | N | G | R | E | I | L | N | L | P | E | H | E | L | N |
Query Conservation |   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |
|   |   |
|
|
|   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
|   |   |   |   |
|   |   |   |   | . | . | . | . |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|
|   |   |
|   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |
|   |   |   |   |   | . | . | . |   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   | . | . |
Template Sequence |   |
V | K | L | E | N | L | T | K | R | F | . |
. |
. |
. |
G | N | F | T | A | V | N | K | L | N | L | T | I | K | D | G | E | F | L | V | L | L | G | P | S | G | C | G | K | T | T | T | L | R | M | I | A | G | L | E | E | P | T | . |
. |
. |
E | G | R | I | Y | F | G | D | R | D | V | T | Y | L | P | P | K | D | . |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . | . | . | . | T | T |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |
|
| T | T | S | S |  |  |  |  |  |  |  |  |  | T | S | S |
|
| S | . | . | . |  |  |  |  |  |  | T | T |  |  |
| T | T | S |
| G | G | G | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . |
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | |
|
|
|
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
|
. | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
|
  |
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | L | R | A | E | Q | I | S | M | I | F | Q | D | P | M | T | S | L | N | P | Y | M | R | V | G | E | Q | L | M | E | V | L | M | L | H | K | N | M | S | K | A | E | A | F | E | E | S | V | R | M | L | D | A | V | K | M | P | E | A | R | K | R | M | K | M | Y | P | H | E | F | S | G | G | M | R | Q | R | V | M | I |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |   |
|   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |
|
|
|   |
|
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . |   |   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . |   |
|
|   |
|   |
|   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| . | . | . |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
|
|
|   |
|
Template Sequence |   |
. |
. |
. |
. |
R | N | I | S | M | V | F | Q | H | . |
. |
. |
. |
. |
. |
. |
. |
M | T | V | Y | E | N | I | A | F | P | L | K | . |
. |
. |
K | F | P | K | D | E | I | D | K | R | V | R | W | A | A | E | L | L | Q | I | . |
. |
. |
E | E | L | L | N | R | Y | P | A | Q | L | S | G | G | Q | R | Q | R | V | A | V |
Template Known Secondary structure |   |
. | . | . | . | G | T |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  | T | T |
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . | . | . | G | G | G | T | T | S |
| T | T | T |
|
| S | S |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . |
|
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
84 | . | . | . | . | . | 90 | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 100 | . | . | . | . | |
|
|
. | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | |
|
|
. | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
  |
  |   |
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | M | A | L | L | C | R | P | K | L | L | I | A | D | E | P | T | T | A | L | D | V | T | V | Q | A | Q | I | M | T | L | L | N | E | L | K | R | E | F | N | T | A | I | I | M | I | T | H | D | L | V | V | V | A | G | I | C | D | K | V | L | V | M | Y | A | G | R | T | M | E | Y | G | N | A | R | D | V | F | Y | Q |
Query Conservation |   |
|
|
|
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|
|
|
|   |
|
|   |   |
|   |
|
|
|   |
|   |   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |
|   |
|   |   |   |
|   |   |   |
|
|   |   |   |
Template Sequence |   |
A | R | A | I | V | V | E | P | D | V | L | L | M | D | E | P | L | S | N | L | D | A | K | L | R | V | A | M | R | A | E | I | K | K | L | Q | Q | K | L | K | V | T | T | I | Y | V | T | H | D | Q | V | E | A | M | T | M | G | D | R | I | A | V | M | N | R | G | Q | L | L | Q | I | G | S | P | T | E | V | Y | L | R |
Template Known Secondary structure |   |
 |  |  |  | T | T |
|
| S |  |  |  |  |  | S | T | T | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |
| S |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
154 | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . |
  |
  |   |
260 | . | . | . | . | . | . | . | . | . | 270 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | V | H | P | Y | S | I | G | L | L | N | A |
Query Conservation |   |
|   |
|
|
|
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |
|
Template Sequence |   |
P | N | S | V | F | V | A | T | F | I | G | A |
Template Known Secondary structure |   |
| S | S |  |  |  |  |  |  | S |
|
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
234 | . | . | . | . | . | 240 | . | . | . | . | . |
  |