Return to main results Retrieve Phyre Job Id

Job DescriptionP76027
Confidence97.64%DateThu Jan 5 12:17:33 GMT 2012
Rank117Aligned Residues34
% Identity32%Templatec3qkuB_
PDB info PDB header:replicationChain: B: PDB Molecule:dna double-strand break repair rad50 atpase; PDBTitle: mre11 rad50 binding domain in complex with rad50 and amp-pnp
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70...
Predicted Secondary structure 












Query SS confidence 


































Query Sequence  VNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLL
Query Conservation 
  


 
  


 



 








  
 

 
Alig confidence 










.






















Template Conservation       
 
   .
 

 
 








 

   
Template Sequence  HSDTVVEFKEG. INLIIGQNGSGKSSLLDAILVGL
Template Known Secondary structure 

S.
TTSS
Template Predicted Secondary structure 






.





Template SS confidence 


































   14.....20.... .....30.........40.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions