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Job DescriptionP76027
Confidence100.00%DateThu Jan 5 12:17:33 GMT 2012
Rank47Aligned Residues233
% Identity22%Templatec3ozxA_
PDB info PDB header:hydrolase, translationChain: A: PDB Molecule:rnase l inhibitor; PDBTitle: crystal structure of abce1 of sulfolubus solfataricus (-fes domain)
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SVIETATVPLAQQQADALLNVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGG
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Template Sequence  NMKIRPDEIKFMLKLKTKMKWTKIIKKLGDF. . . . . QLVVDNGEAKEGEIIGILGPNGIGKTTFARILVGEITAD. . . EG
Template Known Secondary structure  T
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   316...320.........330.........340...... ...350.........360.........370.........380..... ..
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  SATFNGREILNLPEHELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARKR
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Template Sequence  SVTPEKQI. . . . . . . . . . . . . . . . LSYKPQRIF. . PNYDGTVQQYLENASKDALSTSSWFFEEVTKRLNL. . . . . . . HRL
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   398.400..... ....410.... .....420.........430.........440......... 450..
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  MKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLVVVAGICDKVLV
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Template Sequence  LESNVNDLSGGELQKLYIAATLAKEADLYVLDQPSSYLDVEERYIVAKAIKRVTRERKAVTFIIDHDLSIHDYIADRIIV
Template Known Secondary structure  TTSBGGG

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   453......460.........470.........480.........490.........500.........510.........520.........530..
 
   242.......250..... ....260........
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Query Sequence  MYAGRTMEYGNARD. . VFYQPVHPYSIGL
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Template Sequence  FK. GEPEKAGLATSPVTLKTGMNEFLREL
Template Known Secondary structure  .TTT


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   533. .....540.........550.........560
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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