Job Description P76027 Confidence 95.65% Date Thu Jan 5 12:17:33 GMT 2012 Rank 363 Aligned Residues 160 % Identity 16% Template c3kx2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:pre-mrna-splicing factor atp-dependent rna PDBTitle: crystal structure of prp43p in complex with adp Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	A	G	E	T	L	G	I	V	G	E	S	G	S	G	K	S	Q	T	A	F	A	L	M	G	L	L	A	A	N	G	R	I	G	G	S	A	T	F	N	G	R	E	I	L	N	L	P	E	H	E	L	N	K	L	R	A	E	Q	I	S	M	I	F	Q	D	P	M	T	S	L	N	P	Y	M	R	V	G	E
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	Q	N	N	Q	I	M	V	F	V	G	E	T	G	S	G	K	T	T	Q	I	P	Q	F	V	L	F	D	E	M	P	H	L	E	N	T	Q	V	A	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	P	R	R	V	A	A	M
Template Known Secondary structure						S								T	T	S	S															G	G	G	G	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.																																.	.	.	.	150	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		Q	L	M	E	V	L	M	L	H	K	N	M	S	K	A	E	A	F	E	E	S	V	R	M	L	D	A	V	K	M	P	E	A	R	K	R	M	K	M	Y	P	H	E	F	S	G	G	M	R	Q	R	V	M	I	A	M	A	L	L	C	R	P	K	L	L	I	A	D	E	P	.	T	T	A	L	D	V	T	V	Q
Query Conservation																																																																								.
Alig confidence																																						.	.	.	.	.	.	.																												.
Template Conservation																																						.	.	.	.	.	.	.
Template Sequence		S	V	A	Q	R	V	A	E	E	M	D	V	K	L	G	E	E	V	G	Y	S	I	R	F	E	N	K	T	S	N	K	T	I	L	K	Y	.	.	.	.	.	.	.	M	T	D	G	M	L	L	R	E	A	M	E	D	H	D	L	S	R	Y	S	C	I	I	L	D	E	A	H	E	R	T	L	A	T	D	I	L
Template Known Secondary structure											T	T			B	T	T	T						T	T						T	T						.	.	.	.	.	.	.														T	T		T	T									G	G	G
Template Predicted Secondary structure																																						.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190								.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	I	M	T	L	L	N	E	L	K	R	E	F	N	T	A	I	I	M	I	T	H	D	L	V	V	V	A	G	I	C	D	K	V	L	V	M	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	G	L	L	K	Q	V	V	K	R	R	P	D	L	K	I	I	I	M	S	A	T	L	D	A	E	K	F	Q	R	Y	F	N	D	A	P	L	L	A
Template Known Secondary structure													T	T								S	S	S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions