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Job DescriptionP76027
Confidence100.00%DateThu Jan 5 12:17:33 GMT 2012
Rank21Aligned Residues243
% Identity21%Templatec3gd7C_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:fusion complex of cystic fibrosis transmembrane PDBTitle: crystal structure of human nbd2 complexed with n6-2 phenylethyl-atp (p-atp)
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.........80.........90....
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Query Sequence  QADALLNVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLP
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Template Sequence  PSGGQMTVKDLTAKYTEGGN. . AILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNT. . . . EGEIQIDGVSWDSIT
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TT

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   1205....1210.........1220.... .....1230.........1240.........1250.........1260... ......1270........
 
   95....100.........110.........120.........130.........140.........150.........160.........170....
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Query Sequence  EHELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMR
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Template Sequence  LEQWR. . . . KAFGVIPQKVFIFS. . . GTFRKNLDPNAAHSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHK
Template Known Secondary structure  G....GGS





S...SB
TTS
S
TTTT
TTTGGGSTTGGG
B

TTTTTS
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   12791280... ......1290....... ..1300.........1310.........1320.........1330.........1340.........1350.
 
   175....180.........190.........200.........210.........220.........230.........240.........250....
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Query Sequence  QRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLVVVAGICDKVLVMYAGRTMEYGNAR
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Template Sequence  QLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTL. . . KQAFADCTVILCEARIEAMLECDQFLVIEENKVRQYDSIL
Template Known Secondary structure  TT

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SSGGGSTT
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   1352.......1360.........1370.........1380........ .1390.........1400.........1410.........1420........
 
   255....260.........270...
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Query Sequence  DVFYQPVHPYSIGLLNAVP
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Template Sequence  ELYHYPADRFVAGFIGSPK
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   14291430.........1440.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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