 |
Job Description | P76027 | Confidence | 94.51% | Date | Thu Jan 5 12:17:33 GMT 2012 |
Rank | 498 | Aligned Residues | 50 |
% Identity | 28% | Template | c3a5dB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:v-type atp synthase alpha chain; |
PDBTitle: inter-subunit interaction and quaternary rearrangement2 defined by the central stalk of prokaryotic v1-atpase
|
Resolution | 4.80 Å |
|
  |   |
44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | S | L | R | A | G | E | T | L | G | I | V | G | E | S | G | S | G | K | S | Q | T | A | F | A | L | M | G | L | L | A | A | N | G | R | I | G | G | S | A | T | F | N | G | R | E | I | L | N | L |
Query Conservation |   |
|   |
|   |   |
|
|
|   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|   |   |
|   |
|   |   |
|   |
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|
|
|   |   |
|
|   |
|   |
Template Sequence |   |
F | P | V | A | M | G | G | T | A | A | I | P | G | P | F | G | S | G | K | T | V | T | Q | Q | S | L | A | K | W | S | N | A | D | V | V | V | Y | V | G | C | G | E | R | G | N | E | M | T | D | V |
Template Known Secondary structure |   |
S |
|
| B | T | T |
|  |  |  |  |  |
| S | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  | S | S |
| S |  |  |  |  |  |
|
| S |
|
| T | T | T | T |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
216 | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|