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Job DescriptionP76027
Confidence100.00%DateThu Jan 5 12:17:33 GMT 2012
Rank57Aligned Residues247
% Identity26%Templatec2ygrD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:uvrabc system protein a; PDBTitle: mycobacterium tuberculosis uvra
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60....... ..70.........
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Query Sequence  SVIETATVPLAQQQADALLNVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAF. . ALMGLLAANGRI
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Template Sequence  RESIEIPAIRRSVDPRRQLTVVGAREHN. . . . . . . . . LRGIDVSFPLGVLTSVTGVSGSGKSTLVNDILAAVLANRL. . .
Template Known Secondary structure  S





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   609610.........620.........630...... ...640.........650.........660.........670......
 
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Query Sequence  GGSATFNGREILNLPEHELNKLRAEQISMIFQDP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  NGARQVPGRHTRVTGLDYL. . . . . DKLVRIDQSPIGRTPRSNPATYTGVFDKIRTLFAATNEAKVRGYKPGRFSFNVKGG
Template Known Secondary structure  S






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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MTSLNPYMRVGEQLME. VLMLHKNMSKAEAFEESVRMLDAVKM
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Template Sequence  RCEACTGDGTIKIEMNFLPDVYVPCEVCQGARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGL
Template Known Secondary structure  B
SSSTTSS

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   752.......760.........770.........780.........790.........800.........810.........820.........830.
 
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Query Sequence  PEARKRMKMYPHEFSGGMRQRVMIAMALLCR. . . PKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLVVV
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Template Sequence  G. . YVRLGQPAPTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDK. GNTVIVIEHNLDVI
Template Known Secondary structure  S..SSBTT

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   832 .......840.........850.........860.........870.........880.........890.... .....900........
 
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Query Sequence  AGICDKVLVM. . . . . . YAGRTMEYGNARDVFYQPVHPYSIGLLN
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Template Sequence  KT. SDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPAS. YTGKFLA
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SSSSTTS
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   909910 .........920.........930.........940... ......950
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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