Job Description P76027 Confidence 100.00% Date Thu Jan 5 12:17:33 GMT 2012 Rank 27 Aligned Residues 220 % Identity 30% Template c2pcjB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:lipoprotein-releasing system atp-binding protein lold; PDBTitle: crystal structure of abc transporter (aq_297) from aquifex aeolicus2 vf5 Resolution 1.70 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	N	V	K	D	L	R	V	T	F	S	T	P	D	G	D	V	T	A	V	N	D	L	N	F	S	L	R	A	G	E	T	L	G	I	V	G	E	S	G	S	G	K	S	Q	T	A	F	A	L	M	G	L	L	A	A	N	G	R	I	G	G	S	A	T	F	N	G	R	E	I	L	N	L	P	E	H	E
Query Conservation
Alig confidence														.	.	.	.																																												.	.	.
Template Conservation														.	.	.	.																																												.	.	.
Template Sequence		E	I	L	R	A	E	N	I	K	K	V	I	.	.	.	.	R	G	Y	E	I	L	K	G	I	S	L	S	V	K	K	G	E	F	V	S	I	I	G	A	S	G	S	G	K	S	T	L	L	Y	I	L	G	L	L	D	A	P	T	.	.	.	E	G	K	V	F	L	E	G	K	E	V	D	Y	T	N	E	K	E
Template Known Secondary structure														.	.	.	.	T	T													T	T									T	T	S										T	T	S	S			S	.	.	.							T	T					T	T
Template Predicted Secondary structure														.	.	.	.																																												.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.					.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	K	L	R	A	E	Q	I	S	M	I	F	Q	D	P	M	T	S	L	N	P	Y	M	R	V	G	E	Q	L	M	E	V	L	M	L	H	K	N	M	S	K	A	E	A	F	E	E	S	V	R	M	L	D	A	V	K	M	P	E	A	R	K	R	M	K	M	Y	P	H	E	F	S	G	G	M	R	Q	R	V
Query Conservation
Alig confidence																			.	.																		.																						.	.	.
Template Conservation																			.	.																		.																						.	.	.
Template Sequence		L	S	L	L	R	N	R	K	L	G	F	V	F	Q	F	H	Y	.	.	L	I	P	E	L	T	A	L	E	N	V	I	V	P	M	L	K	.	M	G	K	P	K	K	E	A	K	E	R	G	E	Y	L	L	S	E	L	G	L	.	.	.	G	D	K	L	S	R	K	P	Y	E	L	S	G	G	E	Q	Q	R	V
Template Known Secondary structure															S	S			.	.			T	T	S													.	T	T																	T	T		.	.	.	T	T		T	T			G	G	G	S
Template Predicted Secondary structure																			.	.																		.																						.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	A	M	A	L	L	C	R	P	K	L	L	I	A	D	E	P	T	T	A	L	D	V	T	V	Q	A	Q	I	M	T	L	L	N	E	L	K	R	E	F	N	T	A	I	I	M	I	T	H	D	L	V	V	V	A	G	I	C	D	K	V	L	V	M	Y	A	G	R	T	M	E	Y	G	N
Query Conservation
Alig confidence																																									.																.
Template Conservation																																									.																.
Template Sequence		A	I	A	R	A	L	A	N	E	P	I	L	L	F	A	D	E	P	T	G	N	L	D	S	A	N	T	K	R	V	M	D	I	F	L	K	I	N	E	.	G	G	T	S	I	V	M	V	T	H	E	R	E	L	A	.	E	L	T	H	R	T	L	E	M	K	D	G	K	V	V	G	E	I	T
Template Known Secondary structure								T	T			S						S	T	T	T	T	S																		.	T	T								S						.	T	T	S	S							T	T
Template Predicted Secondary structure																																									.																.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions