Job Description P76027 Confidence 100.00% Date Thu Jan 5 12:17:33 GMT 2012 Rank 14 Aligned Residues 246 % Identity 27% Template c2d62A_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:multiple sugar-binding transport atp-binding PDBTitle: crystal structure of multiple sugar binding transport atp-2 binding protein Resolution 2.10 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	A	L	L	N	V	K	D	L	R	V	T	F	S	T	P	D	G	D	V	T	A	V	N	D	L	N	F	S	L	R	A	G	E	T	L	G	I	V	G	E	S	G	S	G	K	S	Q	T	A	F	A	L	M	G	L	L	A	A	N	G	R	I	G	G	S	A	T	F	N	G	R	E	I	L	N	L	P	E
Query Conservation
Alig confidence																.	.	.	.																																												.	.	.
Template Conservation																.	.	.	.																																												.	.	.
Template Sequence		G	X	A	E	V	K	L	I	N	I	W	K	R	F	.	.	.	.	G	D	V	T	A	V	K	D	L	S	L	E	I	K	D	G	E	F	L	V	L	L	G	P	S	G	C	G	K	T	T	T	L	R	X	I	A	G	L	E	E	P	T	.	.	.	R	G	Q	I	Y	I	E	D	N	L	V	A	D	P	E	K
Template Known Secondary structure		S			S											.	.	.	.	T	T													T	T								S	T	T	S	S										T	S	S			S	.	.	.							T	T						G	G	G
Template Predicted Secondary structure																.	.	.	.																																												.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.					.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	L	N	K	L	R	A	E	Q	I	S	M	I	F	Q	D	P	M	T	S	L	N	P	Y	M	R	V	G	E	Q	L	M	E	V	L	M	L	H	K	N	M	S	K	A	E	A	F	E	E	S	V	R	M	L	D	A	V	K	M	P	E	A	R	K	R	M	K	M	Y	P	H	E	F	S	G	G	M	R	Q
Query Conservation
Alig confidence																				.	.																			.																						.	.	.
Template Conservation																				.	.																			.																						.	.	.
Template Sequence		G	V	F	V	P	P	K	E	R	D	V	A	X	V	F	Q	S	Y	.	.	A	L	Y	P	H	X	T	V	Y	D	N	I	A	F	P	L	K	L	.	R	K	V	P	K	Q	E	I	D	K	R	V	R	E	V	A	E	X	L	G	L	.	.	.	T	E	L	L	N	R	K	P	R	E	L	S	G	G	Q	R	Q
Template Known Secondary structure		T									T							S		.	.				T	T	S												T	.	T	T																	T	T		.	.	.	G	G	G	T	T			G	G	G	S
Template Predicted Secondary structure																				.	.																			.																						.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	M	I	A	M	A	L	L	C	R	P	K	L	L	I	A	D	E	P	T	T	A	L	D	V	T	V	Q	A	Q	I	M	T	L	L	N	E	L	K	R	E	F	N	T	A	I	I	M	I	T	H	D	L	V	V	V	A	G	I	C	D	K	V	L	V	M	Y	A	G	R	T	M	E	Y	G	N	A	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	A	L	G	R	A	I	I	R	R	P	K	V	F	L	X	D	E	P	L	S	N	L	D	A	K	L	R	V	K	X	R	A	E	L	K	K	L	Q	R	Q	L	G	V	T	T	I	Y	V	T	H	D	Q	V	E	A	X	T	X	G	D	R	I	A	V	X	N	K	G	E	L	Q	Q	V	G	T	P	D	E
Template Known Secondary structure										S	S			S						S	T	T	T	T																					T								S										S							T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	Y	Q	P	V	H	P	Y	S	I	G	L	L	N	A	V	P	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Y	Y	K	P	V	N	T	F	V	A	G	F	I	G	S	P	P	X
Template Known Secondary structure					S		S	B							S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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