Job Description P76027 Confidence 100.00% Date Thu Jan 5 12:17:33 GMT 2012 Rank 41 Aligned Residues 224 % Identity 21% Template c2cbzA_ PDB info PDB header:transport Chain: A: PDB Molecule:multidrug resistance-associated protein 1; PDBTitle: structure of the human multidrug resistance protein 12 nucleotide binding domain 1 Resolution 1.5 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	V	K	D	L	R	V	T	F	S	T	P	D	G	D	V	T	A	V	N	D	L	N	F	S	L	R	A	G	E	T	L	G	I	V	G	E	S	G	S	G	K	S	Q	T	A	F	A	L	M	G	L	L	A	A	N	G	R	I	G	G	S	A	T	F	N	G	R	E	I	L	N	L	P	E	H	E	L	N
Query Conservation
Alig confidence																			.	.																																							.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.																																							.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	V	R	N	A	T	F	T	W	A	R	S	D	P	P	T	.	.	L	N	G	I	T	F	S	I	P	E	G	A	L	V	A	V	V	G	Q	V	G	C	G	K	S	S	L	L	S	A	L	L	A	E	M	D	K	V	.	.	.	E	G	H	V	A	I	K	G	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											S		T	T	S			S	.	.										T	T								S	T	T	S	S									T	T		S				.	.	.								S	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.																																							.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		644	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660			.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.				.	700	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	R	A	E	Q	I	S	M	I	F	Q	D	P	M	T	S	L	N	P	Y	M	R	V	G	E	Q	L	M	E	V	L	M	L	H	K	N	M	S	K	A	E	A	F	E	E	S	V	R	M	L	D	A	V	K	M	P	E	A	R	K	R	M	K	M	Y	P	H	E	F	S	G	G	M	R	Q	R	V	M	I
Query Conservation
Alig confidence		.	.	.	.	.										.	.	.
Template Conservation		.	.	.	.	.										.	.	.
Template Sequence		.	.	.	.	.	S	V	A	Y	V	P	Q	Q	A	.	.	.	W	I	Q	N	D	S	L	R	E	N	I	L	F	G	C	Q	L	E	E	P	Y	Y	R	S	V	I	Q	A	C	A	L	L	P	D	L	E	I	L	P	S	G	D	R	T	E	I	G	E	K	G	V	N	L	S	G	G	Q	K	Q	R	V	S	L
Template Known Secondary structure		.	.	.	.	.							S	S		.	.	.				S									T	T	S				T	T									T	T						T	T	S	T	T	G	G	G	S			S	T	T	S	B
Template Predicted Secondary structure		.	.	.	.	.										.	.	.
Template SS confidence
							707	.	.	710	.	.	.	.	.				.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		A	M	A	L	L	C	R	P	K	L	L	I	A	D	E	P	T	T	A	L	D	V	T	V	Q	A	Q	I	M	T	L	L	N	E	L	K	.	R	E	F	N	T	A	I	I	M	I	T	H	D	L	V	V	V	A	G	I	C	D	K	V	L	V	M	Y	A	G	R	T	M	E	Y	G	N	A	R	D	V	F	Y
Query Conservation																																						.
Alig confidence																																						.																				.
Template Conservation																																																										.
Template Sequence		A	R	A	V	Y	S	N	A	D	I	Y	L	F	D	D	P	L	S	A	V	D	A	H	V	G	K	H	I	F	E	N	V	I	G	P	K	G	M	L	K	N	K	T	R	I	L	V	T	H	S	M	S	Y	L	P	Q	.	V	D	V	I	I	V	M	S	G	G	K	I	S	E	M	G	S	Y	Q	E	L	L	A
Template Known Secondary structure										S						S	T	T	T	T	S												T	T	S	T	T	S	T	T	T	T	S							S		S	T	T	G	G	G	.	S	S							T	T
Template Predicted Secondary structure																																																										.
Template SS confidence
		779	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.		.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	V	H	P	Y	S	I	G	L	L	N	A
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		R	.	.	D	G	A	F	A	E	F	L	R	T
Template Known Secondary structure			.	.	T	S
Template Predicted Secondary structure			.	.
Template SS confidence
		858			.	860	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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