Job Description P76027 Confidence 100.00% Date Thu Jan 5 12:17:33 GMT 2012 Rank 5 Aligned Residues 264 % Identity 24% Template c1z47B_ PDB info PDB header:ligand binding protein Chain: B: PDB Molecule:putative abc-transporter atp-binding protein; PDBTitle: structure of the atpase subunit cysa of the putative2 sulfate atp-binding cassette (abc) transporter from3 alicyclobacillus acidocaldarius Resolution 1.90 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	V	K	D	L	R	V	T	F	S	T	P	D	G	D	V	T	A	V	N	D	L	N	F	S	L	R	A	G	E	T	L	G	I	V	G	E	S	G	S	G	K	S	Q	T	A	F	A	L	M	G	L	L	A	A	N	G	R	I	G	G	S	A	T	F	N	G	R	E	I	L	N	L	P	E	H	E	L	N
Query Conservation
Alig confidence																.	.	.																																									.	.	.																			.	.
Template Conservation																.	.	.																																									.	.	.																			.	.
Template Sequence		I	E	F	V	G	V	E	K	I	Y	P	G	G	A	.	.	.	R	S	V	R	G	V	S	F	Q	I	R	E	G	E	M	V	G	L	L	G	P	S	G	S	G	K	T	T	I	L	R	L	I	A	G	L	E	R	P	T	.	.	.	K	G	D	V	W	I	G	G	K	R	V	T	D	L	P	P	Q	K	.	.
Template Known Secondary structure												T	T	S	T	.	.	.	T											T	T								S	T	T	S	S										T	S	S			S	.	.	.							T	T				T	T			G	G	G	.	.
Template Predicted Secondary structure																.	.	.																																									.	.	.																			.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	R	A	E	Q	I	S	M	I	F	Q	D	P	M	T	S	L	N	P	Y	M	R	V	G	E	Q	L	M	E	V	L	M	L	H	K	N	M	S	K	A	E	A	F	E	E	S	V	R	M	L	D	A	V	K	M	P	E	A	R	K	R	M	K	M	Y	P	H	E	F	S	G	G	M	R	Q	R	V	M	I
Query Conservation
Alig confidence		.	.	.	.										.	.																				.																						.	.	.
Template Conservation		.	.	.	.										.	.																				.																						.	.	.
Template Sequence		.	.	.	.	R	N	V	G	L	V	F	Q	N	.	.	Y	A	L	F	Q	H	M	T	V	Y	D	N	V	S	F	G	L	R	E	.	K	R	V	P	K	D	E	M	D	A	R	V	R	E	L	L	R	F	M	R	L	.	.	.	E	S	Y	A	N	R	F	P	H	E	L	S	G	G	Q	Q	Q	R	V	A	L
Template Known Secondary structure		.	.	.	.	S	S						T	T	.	.					T	T	S								T	T	G	G	G	.	T	T																	T	T		.	.	.	G	G	G	T	T	S		G	G	G	S
Template Predicted Secondary structure		.	.	.	.										.	.																				.																						.	.	.
Template SS confidence
						87	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	A	L	L	C	R	P	K	L	L	I	A	D	E	P	T	T	A	L	D	V	T	V	Q	A	Q	I	M	T	L	L	N	E	L	K	R	E	F	N	T	A	I	I	M	I	T	H	D	L	V	V	V	A	G	I	C	D	K	V	L	V	M	Y	A	G	R	T	M	E	Y	G	N	A	R	D	V	F	Y	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	A	L	A	P	R	P	Q	V	L	L	F	D	E	P	F	A	A	I	D	T	Q	I	R	R	E	L	R	T	F	V	R	Q	V	H	D	E	M	G	V	T	S	V	F	V	T	H	D	Q	E	E	A	L	E	V	A	D	R	V	L	V	L	H	E	G	N	V	E	Q	F	G	T	P	E	E	V	Y	E	K
Template Known Secondary structure						T	T			S						S	T	T	T	T	S																												S										S							T	T														S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		P	V	H	P	Y	S	I	G	L	L	N	A	V	P	R	L	D	A	E	.	.	G	E	T	M	L	T	I	P	G	N	P	P	N	L	L	R	L	P	K	G	C	P	F
Query Conservation																					.	.
Alig confidence																					.	.
Template Conservation
Template Sequence		P	G	T	L	F	V	A	S	F	I	G	E	S	N	V	W	T	R	A	V	Q	N	G	R	I	E	V	A	G	A	A	L	P	V	D	P	A	V	S	E	G	S	E	V
Template Known Secondary structure			S	S							S	S										B	T	T				S	S	S							T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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