Job Description P77309 Confidence 44.73% Date Thu Jan 5 12:27:37 GMT 2012 Rank 319 Aligned Residues 197 % Identity 13% Template d1atga_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.20

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150											.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	G	S	L	E	S	T	A	A	V	R	I	P	A	T	L	A	E	F	N	R	R	Y	P	K	I	Q	F	S	L	S	T	G	P	S	G	T	M	L	D	G	V	L	E	G	K	L	N	A	A	F	I	D	G	P	I	N	H	.	.	.	.	.	.	.	.	.	.	T	A	I	D	G	I	P	V	Y	R	E
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.
Alig confidence																											.																																		.	.	.	.	.	.	.	.	.	.
Template Conservation																											.
Template Sequence		L	K	V	V	T	A	T	N	F	L	G	T	L	E	Q	L	A	G	Q	F	A	K	Q	T	G	.	H	A	V	V	I	S	S	G	S	S	G	P	V	Y	A	Q	I	V	N	G	A	P	Y	N	V	F	F	S	A	D	E	K	S	P	E	K	L	D	N	Q	G	F	A	L	P	G	S	R	F	T	Y	A	I	G
Template Known Secondary structure								G	G	G																	.																			T	T				S					S	S	S									T	T		B		T	T
Template Predicted Secondary structure																											.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.						.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.
Predicted Secondary structure																										.	.	.	.																						.	.	.	.	.																								.
Query SS confidence																										.	.	.	.																						.	.	.	.	.																								.
Query Sequence		E	L	M	I	V	T	P	Q	G	Y	A	P	V	T	R	A	S	Q	V	N	G	S	N	I	.	.	.	.	Y	A	F	R	A	N	C	S	Y	R	R	H	F	E	S	W	F	H	A	D	G	.	.	.	.	.	A	A	P	G	T	I	H	E	M	E	S	Y	H	G	M	L	A	C	V	I	A	G	A	.	G	I
Query Conservation																										.	.	.	.																						.	.	.	.	.																								.
Alig confidence																										.	.	.	.																						.	.	.	.	.																								.
Template Conservation
Template Sequence		K	L	V	L	W	S	A	K	P	G	L	V	D	N	Q	G	K	V	L	A	G	N	G	W	R	H	I	A	I	S	N	P	Q	I	A	P	Y	G	L	A	G	T	Q	V	L	T	H	L	G	L	L	D	K	L	T	A	Q	E	R	I	V	E	A	N	S	V	G	Q	A	H	S	Q	T	A	S	G	A	A	D	L
Template Known Secondary structure								S	S	T	T	T	S		T	T	S	G	G	G	G	S	S	S		S							T	T	T														T	T								T	T						S	S										T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.																												.
Query SS confidence																		.																												.
Query Sequence		A	L	I	P	R	S	M	L	E	S	M	P	G	H	H	Q	.	V	E	A	W	P	L	A	E	Q	W	R	W	L	T	T	W	L	V	W	R	R	G	A	K	T	R	P	.	L	E	A	F	I	Q	L	L	D	V	P	D	S	A	R
Query Conservation																		.																												.
Alig confidence																		.																												.
Template Conservation
Template Sequence		G	F	V	A	L	A	Q	I	I	Q	A	A	A	K	I	P	G	S	H	W	F	P	P	A	N	Y	Y	E	P	I	V	Q	Q	A	V	I	T	K	S	T	A	E	K	A	N	A	E	Q	F	M	S	W	M	K	G	P	K	A	V	A
Template Known Secondary structure						G	G	G	T			T	T	S			S	S							G	G	G	S										B	T	T		S												T	T	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions