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Job DescriptionP77309
Confidence99.43%DateThu Jan 5 12:27:37 GMT 2012
Rank36Aligned Residues201
% Identity15%Templatec3mz1D_
PDB info PDB header:transcription regulatorChain: D: PDB Molecule:putative transcriptional regulator; PDBTitle: the crystal structure of a possible transcription regulator protein2 from sinorhizobium meliloti 1021
Resolution1.88 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   87..90.........100.........110.........120.........130.........140.........150.........160......
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Query Sequence  PQGLFSLGSLESTAAVRIPATLAEFNRRYPKIQFSLSTGPSGTMLDGVLEGKLNAAFIDGPINHTAIDGIPVYREELMIV
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Template Sequence  PKGRLRVETASAFANLVIIPALPEFHKKYPDIQIDLGVSDRTI. . . DYLAENVDCAIRAGTLTDQSLIARRITEXKFVAC
Template Known Secondary structure 


T
TT



T...T


TT

S



TTS
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   84.....90.........100.........110.........120...... ...130.........140.........150.........160
 
   167..170.........180........ .190.........200.........210.........220.........230........
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Query Sequence  TPQGYAPVTRASQVNGSNIYAF. . . . . . . . RANCSYRRHFESWFHADGAAPGTIHEMESYHGMLACVIAGAGIALIPRSM
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Template Sequence  ASRDFLERHPVPQHPSDLEKNCYVVGYFLPKTGQQXPFHFRRGNEEIEVSGRYTXAANESTTYLAAARAGLGVIQAPLFX
Template Known Secondary structure  S


SSGGGGGTTS
TTTT

TT


SSTT

B
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   239240.........250.........260.........270. ........280.........290
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Query Sequence  LESMPGHHQVEAWPLAEQWRWLTTWLVWRRGAK. TRPLEAFIQLLDVPDSARQ
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Template Sequence  VREDLRNGTXVPVLPDWQVEPXPIYLVYPPNRHLSSRLRVFADWVVKVXAQSQ
Template Known Secondary structure  TS

TT
B



GGGTT
T
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   241........250.........260.........270.........280.........290...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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