Job Description P77309 Confidence 81.44% Date Thu Jan 5 12:27:37 GMT 2012 Rank 206 Aligned Residues 201 % Identity 11% Template c3muqB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized conserved protein; PDBTitle: the crystal structure of a conserved functionally unknown protein from2 vibrio parahaemolyticus rimd 2210633 Resolution 2.05 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.								.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																														.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.
Query Sequence		Q	G	L	F	S	L	G	S	L	E	S	T	A	A	V	R	I	P	A	T	L	A	E	F	N	R	R	Y	P	K	I	Q	F	S	L	S	T	G	P	S	G	T	M	L	D	G	V	L	E	G	K	L	N	A	A	F	I	D	G	P	.	.	.	.	.	.	.	I	N	H	T	A	I	D	G	I	P	V	Y	R
Query Conservation																																																														.	.	.	.	.	.	.
Alig confidence																															.																															.	.	.	.	.	.	.
Template Conservation																															.
Template Sequence		E	H	V	R	L	A	T	T	T	S	T	Y	H	S	G	L	L	D	Y	L	L	P	Q	F	E	K	D	T	G	.	Y	K	V	D	V	I	A	A	G	T	G	K	A	L	K	X	G	E	N	G	D	V	D	L	V	X	T	H	A	P	K	A	E	G	T	F	V	E	K	G	Y	G	V	L	P	R	K	L	X	Y
Template Known Secondary structure																T	G	G	G	G	T										.																			T	T	S	S	S																T	T	S
Template Predicted Secondary structure																															.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.											.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.																								.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.																								.	.	.
Query Sequence		E	E	L	M	I	V	T	P	Q	G	Y	A	P	V	T	R	A	S	Q	V	N	G	S	N	I	Y	A	.	.	.	.	.	.	.	.	.	.	F	R	A	N	C	S	Y	R	R	H	F	E	S	W	F	H	A	D	G	A	A	P	G	.	.	.	T	I	H	E	M	E	S	Y	H	G	M	L	A	C	V	I	A
Query Conservation																													.	.	.	.	.	.	.	.	.	.																								.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation
Template Sequence		N	D	F	V	I	V	G	P	K	A	D	P	A	K	I	K	D	D	E	S	V	L	D	V	F	K	E	I	A	N	K	N	A	T	F	I	S	R	G	D	D	S	G	T	H	K	K	E	X	G	F	W	A	Q	T	K	I	E	P	N	F	G	G	Y	R	S	V	G	Q	G	X	G	P	T	L	N	X	A	S	E
Template Known Secondary structure										T	T		T	T			T	T		S												T	T								S		S														T					S	T	T
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.						.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.
Query SS confidence																																											.	.	.	.	.
Query Sequence		G	A	G	I	A	L	I	P	R	S	M	L	E	S	M	P	G	H	H	Q	V	E	A	W	P	L	A	E	Q	W	R	W	L	T	T	W	L	V	W	R	R	.	.	.	.	.	G	A	K	T	R	P	L	E	A	F	I	Q	L	L	D	V	P	D	S	A	R
Query Conservation																																											.	.	.	.	.
Alig confidence																																											.	.	.	.	.
Template Conservation
Template Sequence		X	Q	G	Y	T	X	S	D	R	G	T	W	L	A	Y	Q	N	K	L	D	L	E	I	L	F	Q	G	D	E	K	L	F	N	P	Y	Q	V	I	L	V	N	P	E	R	Y	P	T	I	N	Y	Q	G	A	K	A	F	S	D	W	L	V	N	P	R	G	Q	E
Template Known Secondary structure			T														G	G	G		S									G	G	G											T	T	T		T	T	S														S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions