Job Description P77309 Confidence 99.48% Date Thu Jan 5 12:27:37 GMT 2012 Rank 34 Aligned Residues 194 % Identity 15% Template c3hhfB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: structure of crga regulatory domain, a lysr-type transcriptional2 regulator from neisseria meningitidis. Resolution 2.30 Å

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	G	L	F	S	L	G	S	L	E	S	T	A	A	V	R	I	P	A	T	L	A	E	F	N	R	R	Y	P	K	I	Q	F	S	L	S	T	G	P	S	G	T	M	L	D	G	V	L	E	G	K	L	N	A	A	F	I	D	G	P	I	N	H	T	A	I	D	G	I	P	V	Y	R	E	E	L	M	I	V
Query Conservation
Alig confidence																																																	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.
Template Sequence		P	Q	G	V	L	S	V	D	S	A	X	P	X	V	L	H	L	L	A	P	L	A	A	K	F	N	E	R	Y	P	H	I	R	L	S	L	V	S	S	E	G	Y	I	N	L	I	E	.	.	.	.	.	R	K	V	D	I	A	L	R	A	G	D	D	S	G	L	R	A	R	H	L	F	D	S	R	F	R	V	I
Template Known Secondary structure																		T													T	T									S	T	T					T	.	.	.	.	.	T	S	S	S									S	S
Template Predicted Secondary structure																																																	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		T	P	Q	G	Y	A	P	V	T	R	A	S	.	.	.	.	Q	V	N	G	S	N	I	Y	A	F	R	A	N	C	S	Y	R	R	H	F	E	S	W	F	H	A	D	G	A	A	P	G	T	I	H	E	M	E	S	Y	H	G	M	L	A	C	V	I	A	G	A	G	I	A	L	I	P	R	S	M	L	E	S	M
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.
Template Conservation
Template Sequence		A	S	P	E	Y	L	A	K	H	G	T	P	Q	S	T	E	E	L	A	G	H	Q	C	L	G	F	T	E	P	G	S	L	N	T	W	A	V	L	D	A	Q	G	N	P	Y	K	I	S	P	H	F	T	A	S	S	G	E	I	L	R	S	L	C	L	S	G	C	G	I	V	C	L	S	D	F	L	V	D	N	D
Template Known Secondary structure														S	S	G	G	G	G	G	G	S		B				S	S		G	G	G	G							T	T	S								S	S			S	S										T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure											.																					.
Query SS confidence											.																					.
Query Sequence		P	G	H	H	Q	V	E	A	W	.	P	L	A	E	Q	W	R	W	L	T	T	W	L	V	W	R	R	G	A	K	.	T	R	P	L	E	A	F	I	Q	L	L	D	V	P
Query Conservation											.																					.
Alig confidence											.																					.
Template Conservation
Template Sequence		I	A	E	G	K	L	I	P	L	L	A	E	Q	T	S	D	K	T	H	P	F	N	A	V	Y	Y	S	D	K	A	V	N	L	R	L	R	V	F	L	D	F	L	V	E	E
Template Known Secondary structure					T	S	S					T	T	T	B													G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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