Job Description P77309 Confidence 34.60% Date Thu Jan 5 12:27:37 GMT 2012 Rank 363 Aligned Residues 142 % Identity 8% Template c1zvvA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:glucose-resistance amylase regulator; PDBTitle: crystal structure of a ccpa-crh-dna complex Resolution 2.98 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	T	Q	A	A	A	K	V	H	R	V	P	S	N	L	T	T	R	L	R	Q	L	E	T	E	L	G	V	D	L	F	I	R	E	N	Q	R	L	R	L	S	P	A	G	H	N	F	L	R	Y	S	Q	Q	I	L	A	L	V	D	E	A	R	S	V	V	A	G	D	E	P	Q	G	L	F	S	L	G	S	L
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	I	Y	D	V	A	R	E	A	S	V	S	M	A	T	V	S	R	V	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	P	N	V	K	P	S	T	R	K	K	V	L	E	T	I	E	R	L	G	Y	R	P	N	A	V	A	R	G	L	A	S	K	K	T	T	T	V	G	V	I	I	P	D
Template Known Secondary structure			S							T	T	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S		S																T													T			S							S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.															.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.						.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.
Query Sequence		E	S	T	A	A	V	R	I	P	A	T	L	A	E	F	N	R	R	Y	P	K	I	Q	F	S	L	S	T	G	P	S	.	.	.	.	.	G	T	M	L	D	G	V	L	E	G	K	L	N	A	A	F	I	D	G	P	I	N	H	T	A	I	D	G	I	P	V	Y	R	E	E	L	M	I	V	T	P	Q	G	Y
Query Conservation																																	.	.	.	.	.
Alig confidence																																	.	.	.	.	.
Template Conservation
Template Sequence		I	S	N	I	F	Y	A	E	L	A	R	G	I	E	D	I	A	S	M	Y	K	Y	N	I	I	L	S	N	S	D	Q	N	Q	D	K	Q	L	H	L	L	N	N	M	L	G	K	Q	V	D	G	I	I	F	M	S	G	N	V	T	E	E	H	V	E	E	L	K	K	S	P	V	P	V	V	L	A	A	S	I	E
Template Known Secondary structure		T	T	S																	T	T									T	T																T		S							S											T	T		S	S						S
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		172
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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