Job Description P33026 Confidence 1.19% Date Thu Jan 5 11:51:02 GMT 2012 Rank 49 Aligned Residues 170 % Identity 8% Template c3b9yA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	A	M	V	G	F	F	F	T	G	S	A	V	I	G	I	L	V	S	Q	F	L	A	G	R	S	D	K	R	G	D	R	K	S	L	I	V	F	C	C	L	L	G	V	L	A	C	T	L	F	A	W	N	R	N	Y	F	V	L	L	F	V	G	V	F	L	S	S	F	G	S	T	A	N	P	Q	M	F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	F	E	Q	M	P	Q	T	I	V	N	T	L	L	A	L	C	G	A	T	L	A	T	Y	F	L	S	A	L	F	H	K	G	K	A	S	I	V	D	M	A	N	A	A	L	A	G	G	V	A	I	G	S	V	C	N	I	V	G	P	V	G	A	F	V	I	G	L	L	G	G	A	I	S	V	V	G	F	V	F
Template Known Secondary structure			G	G	G																											T	T	T											T	T							T	T	T	T	T	T	S																						T
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		129	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		L	A	R	E	H	A	D	K	.	T	G	R	E	A	V	M	F	S	S	F	L	R	A	Q	V	S	L	A	W	V	I	G	P	P	L	A	Y	A	L	A	M	G	F	S	F	T	V	M	Y	L	S	A	A	V	A	F	I	V	C	G	V	M	V	W	L	F	L	P	S	M	R	K	E	L	P	L	A	T	G	T
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		I	Q	P	M	L	E	S	K	A	K	T	I	D	T	C	G	V	H	N	L	H	G	L	P	G	L	L	G	G	F	S	A	I	L	I	V	P	G	I	A	V	A	Q	L	T	G	I	G	I	T	L	A	L	A	L	I	G	G	V	I	A	G	A	L	I	K	L	T	G	T	T	K	Q	A	Y	E	D	S	H	E
Template Known Secondary structure										S					T	T						T	T														S	T	T																													T	T				S	S	T	T		G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
		208	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	A	P	R	R	N	R	R	D	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	H	L	A	G	P	E	D	E	H
Template Known Secondary structure		S	S	S				G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		384	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions