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Job DescriptionQ46791
Confidence99.47%DateThu Jan 5 12:34:13 GMT 2012
Rank59Aligned Residues166
% Identity13%Templatec3dzdA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4 in the inactive2 state
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGAELVKWVKSHKIDAHIITF
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Template Sequence  RVLVVDDEESITSSLSAILEEEGYH. . . PDTAKTLREAEKKIKELFFPVIVLDVWXPDGDGVNFIDFIKENSPDSVVIVI
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   3......10.........20....... ..30.........40.........50.........60.........70.........
 
   85....90.........100.........110.........120.........130.........140..... ....150........
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Query Sequence  VAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYTYFDSVHMDCEKISSRYSSD. . . . . . NQLTNRESEILQL
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Template Sequence  TGHGSVDTAVKAIKKGAYEFLEKPFSVERFLLTIKHAFEEYSKKAPPQEEIEFVGEHPKILEIKRLIPKIAKSKAPVLIT
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   80.........90.........100.........110.........120.........130.........140.........150.........
 
   159160.........170...
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Query Sequence  IADGKTNKEIANFLQ
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Template Sequence  GESGTGKEIVARLIH
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   160.........170....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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