Job Description Q46791 Confidence 99.61% Date Thu Jan 5 12:34:13 GMT 2012 Rank 22 Aligned Residues 119 % Identity 14% Template c3b2nA_ PDB info PDB header:transcription Chain: A: PDB Molecule:uncharacterized protein q99uf4; PDBTitle: crystal structure of dna-binding response regulator, luxr family, from2 staphylococcus aureus Resolution 2.04 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	I	V	V	S	D	Q	Q	P	F	M	I	D	G	I	I	G	F	L	G	H	Y	P	D	L	Y	E	V	V	G	G	Y	K	D	L	K	K	A	I	A	E	C	N	K	S	T	A	Q	I	F	I	L	G	E	F	A	G	G	M	M	G	A	E	L	V	K	W	V	K	S	H	K	I	D	A	H	I	I	T
Query Conservation
Alig confidence																											.
Template Conservation																											.
Template Sequence		T	S	L	I	I	A	E	D	Q	N	M	L	R	Q	A	M	V	Q	L	I	K	L	H	G	D	.	F	E	I	L	A	D	T	D	N	G	L	D	A	M	K	L	I	E	E	Y	N	P	N	V	V	I	L	D	I	E	M	P	G	M	T	G	L	E	V	L	A	E	I	R	K	K	H	L	N	I	K	V	I	I
Template Known Secondary structure									S																S	S	.								S															S						S	S		S	S	S												T	T		S
Template Predicted Secondary structure																											.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	A	K	M	P	Y	I	D	S	I	K	L	L	E	A	G	A	K	G	C	V	W	K	T	S	H	P	A	K	L	N	R	A	I	D	S	I	S	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	T	F	K	R	P	G	Y	F	E	K	A	V	V	N	D	V	D	A	Y	V	L	K	E	R	S	I	E	E	L	V	E	T	I	N	K	V	N	N
Template Known Secondary structure				S													T	T		S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions