Job Description Q46791 Confidence 59.94% Date Thu Jan 5 12:34:13 GMT 2012 Rank 424 Aligned Residues 83 % Identity 12% Template c2q41D_ PDB info PDB header:transferase Chain: D: PDB Molecule:spermidine synthase 1; PDBTitle: ensemble refinement of the protein crystal structure of spermidine2 synthase from arabidopsis thaliana gene at1g23820 Resolution 2.70 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.						.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.																																										.	.	.	.	.
Query SS confidence																									.	.	.	.	.																																										.	.	.	.	.
Query Sequence		K	I	V	V	S	D	Q	Q	P	F	M	I	D	G	I	I	G	F	L	G	H	Y	P	.	.	.	.	.	D	L	Y	E	V	V	G	G	Y	K	D	L	K	K	A	I	A	E	C	N	K	S	T	A	Q	I	F	I	L	G	E	F	A	G	G	M	M	G	A	E	L	.	.	.	.	.	V	K	W	V	K	S
Query Conservation																									.	.	.	.	.																																										.	.	.	.	.
Alig confidence																									.	.	.	.	.							.	.																																		.	.	.	.	.
Template Conservation																																				.	.
Template Sequence		Q	I	D	X	C	E	I	D	K	X	V	V	D	V	S	K	Q	F	F	P	D	V	A	I	G	Y	E	D	P	R	V	N	L	V	.	.	I	G	D	G	V	A	F	L	K	N	A	A	E	G	S	Y	D	A	V	I	V	D	S	S	D	P	I	G	P	A	K	E	L	F	E	K	P	F	F	Q	S	V	A	R
Template Known Secondary structure																					T	T	T	G	G	G	T	T		T	T					.	.		S								S	S		S	S												S	S	S	G	G	G	G	G	G	S
Template Predicted Secondary structure																																				.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K	I	D	A	H	I	I	T	F	V	A	K	M	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	R	P	G	G	V	V	C	T	Q	A	E	S	L
Template Known Secondary structure																T
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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