Return to main results Retrieve Phyre Job Id

Job DescriptionQ46791
Confidence99.46%DateThu Jan 5 12:34:13 GMT 2012
Rank61Aligned Residues121
% Identity16%Templatec2jrlA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: solution structure of the beryllofluoride-activated ntrc4 receiver2 domain dimer
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGAELVKWVKSHKIDAH
Query Conservation 
   






       
   
        

  
    

        




 
                       
Alig confidence 

..
























...















































Template Conservation 
 .. 





       
   
   
  ...
       


  
     
 

 
  

   
      
        
Template Sequence  MK. . RVLVVDDEESITSSLSAILEEEGYH. . . PDTAKTLREAEKKIKELFFPVIVLDVWMPDGDGVNFIDFIKENSPDSV
Template Known Secondary structure 

..B
S
TT
B...

S
TTS

SS

SSS
STTT
SS
Template Predicted Secondary structure 

..





...
























Template SS confidence 















































































   1. .......10.........20....... ..30.........40.........50.........60.........70.....
 
   81........90.........100.........110.........120......
Predicted Secondary structure 




























Query SS confidence 













































Query Sequence  IITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYT
Query Conservation                                                
Alig confidence 













































Template Conservation 

 

              

  

 

     
   
   
   
Template Sequence  VIVITGHGSVDTAVKAIKKGAYEFLEKPFSVERFLLTIKHAFEEYS
Template Known Secondary structure  SS

TS



Template Predicted Secondary structure 

















Template SS confidence 













































   76...80.........90.........100.........110.........120.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions