Job Description Q46791 Confidence 99.79% Date Thu Jan 5 12:34:13 GMT 2012 Rank 13 Aligned Residues 185 % Identity 18% Template c1p2fA_ PDB info PDB header:transcription Chain: A: PDB Molecule:response regulator; PDBTitle: crystal structure analysis of response regulator drrb, a2 thermotoga maritima ompr/phob homolog Resolution 1.80 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	V	V	S	D	Q	Q	P	F	M	I	D	G	I	I	G	F	L	G	H	Y	P	D	L	Y	E	V	V	G	G	Y	K	D	L	K	K	A	I	A	E	C	N	K	S	T	A	Q	I	F	I	L	G	E	F	A	G	G	M	M	G	A	E	L	V	K	W	V	K	S	H	K	I	D	A	H	I	I	T	F
Query Conservation
Alig confidence																										.	.	.	.													.	.
Template Conservation																										.	.	.	.													.	.
Template Sequence		K	I	A	V	V	D	D	D	K	N	I	L	K	K	V	S	E	K	L	Q	Q	L	G	R	.	.	.	.	V	K	T	F	L	T	G	E	D	F	L	N	.	.	D	E	E	A	F	H	V	V	V	L	D	V	X	L	P	D	Y	S	G	Y	E	I	C	R	X	I	K	E	T	R	P	E	T	W	V	I	L	L
Template Known Secondary structure								S													T	T	T			.	.	.	.					S	S							.	.			S			S						S	B		S	S	S	B													T	T	S
Template Predicted Secondary structure																										.	.	.	.													.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.					.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.
Query Sequence		V	A	K	M	P	Y	I	D	S	I	K	L	L	E	A	G	A	K	G	C	V	W	K	T	S	H	P	A	K	L	N	R	A	I	D	S	I	S	N	G	Y	T	Y	F	D	S	V	H	M	D	C	E	K	I	S	S	R	Y	S	S	D	N	Q	.	.	.	.	.	L	T	N	R	E	S	E	I	L	Q	L	I
Query Conservation																																																																	.	.	.	.	.
Alig confidence																																																																	.	.	.	.	.
Template Conservation
Template Sequence		T	L	L	S	D	D	E	S	V	L	K	G	F	E	A	G	A	D	D	Y	V	T	K	P	F	N	P	E	I	L	L	A	R	V	K	R	F	L	E	R	E	K	K	G	L	Y	D	F	G	D	L	K	I	D	A	T	G	F	T	V	F	L	K	G	K	R	I	H	L	P	K	K	E	F	E	I	L	L	F	L
Template Known Secondary structure			S			S											T		S					S	S																				S					T	T					T	T	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		160	.	.					.	.	.	.	.	.	.	170	.	.				.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure					.	.	.	.											.	.	.
Query SS confidence					.	.	.	.											.	.	.
Query Sequence		A	D	G	.	.	.	.	K	T	N	K	E	I	A	N	F	L	.	.	.	Q	L	S	R	K	T	V	E	T	H	R	L	N	I	M	K	K	L	D	V	H	S	G
Query Conservation					.	.	.	.											.	.	.
Alig confidence					.	.	.	.											.	.	.
Template Conservation
Template Sequence		A	E	N	A	G	K	V	V	T	R	E	K	L	L	E	T	F	W	E	D	P	V	S	P	R	V	V	D	T	V	I	K	R	I	R	K	A	I	E	D	D	P	N
Template Known Secondary structure				T	T	T	S													S	S				T																S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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