 |
Job Description | P0AG82 | Confidence | 30.40% | Date | Thu Jan 5 11:28:24 GMT 2012 |
Rank | 100 | Aligned Residues | 74 |
% Identity | 11% | Template | d2a5sa1 |
SCOP info | Periplasmic binding protein-like II
| Periplasmic binding protein-like II
| Phosphate binding protein-like
|
Resolution | 1.70 |
|
 |
  |   |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | Y | A | K | W | A | D | T | Y | Q | K | E | T | G | N | K | V | N | Y | Q | G | I | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | S | G | G | V | K | Q | I | I | A | N | T | V | D | F | G | A | S | D | A | P | L | S | D | E | K | L | A | Q | E | G | L | F | Q | F | P | T | V | I | G | G | V | V | L | A | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . |
|
|   |
|
|   |   |   |   |   |
|   |   |
|
|
|   |
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |   |   |
|
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|   |   |
|
|   |   |   |   |
|
|
|
|   |
|
|   |   |   |
|   |
|
|   | . |
|
|   |   |   |   |   |   |
|   |
|
Template Sequence |   |
F | C | I | D | I | L | K | K | L | S | R | T | V | K | F | T | Y | D | L | Y | L | V | T | N | G | K | H | G | K | K | V | N | N | V | W | N | G | M | I | G | E | V | V | Y | Q | R | A | V | M | A | V | G | S | L | T | I | N | E | E | R | S | E | V | V | D | F | S | V | . |
P | F | V | E | T | G | I | S | V | M | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
|
| S | S | S | S |
|
|  |  | T | T |  |  |
|  |  |  |  |  |  |  | T | T | S |
| S |  |  |
| S | S |
| B |
|
|  |  |  |  | T | T |  |  |  |
|
| . |
|
|  |  |  |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
| . |
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
130 | . | . | . | . | . | . | . | . | . | 140 |
  |
  |   |
109 | 110 | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
N | I | P | G | L | K |
Query Conservation |   |
  |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
Template Sequence |   |
S | R | Q | V | T | G |
Template Known Secondary structure |   |
 |
|
|
|
| S |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
  |   |
141 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|