Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG82
Confidence21.01%DateThu Jan 5 11:28:24 GMT 2012
Rank111Aligned Residues64
% Identity17%Templatec3py7A_
PDB info PDB header:viral proteinChain: A: PDB Molecule:maltose-binding periplasmic protein,paxillin ld1,protein e6 PDBTitle: crystal structure of full-length bovine papillomavirus oncoprotein e62 in complex with ld1 motif of paxillin at 2.3a resolution
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   265....270.........280.........290.........300... .... ..310. ........320.........330.
Predicted Secondary structure 
















...






Query SS confidence 






































.



.



.



















Query Sequence  DLTNQKGEDAWPITSTTFILIHKDQKKPEQGTEVLKFFD. WAYK. TGAK. QANDLDYASLPDSVVEQVRA
Query Conservation          
 


    
               
  

 .  

.


 .     





         
Alig confidence 






























...




.



.



.



















Template Conservation   

   
       
     
   






...  

   
 
 
            
           
Template Sequence  VLPTFKGQPSKPFVGVLSAGINAASPNKELA. . . KEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELA
Template Known Secondary structure 


TT


BTT
S
...TTSSS


SBT
Template Predicted Secondary structure 















...














Template SS confidence 





































































   247..250.........260.........270....... ..280.........290.........300.........310...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions