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Job DescriptionP0AG82
Confidence92.38%DateThu Jan 5 11:28:24 GMT 2012
Rank53Aligned Residues198
% Identity16%Templatec3n6uA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:lysr type regulator of tsambcd; PDBTitle: effector binding domain of tsar in complex with its inducer p-2 toluenesulfonate
Resolution1.87 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  ASLTGAGATFPAP. VYAKWADTY. QKETGNKVNYQGIGSSGGVKQIIANTVDFGASDAPLSDEKLAQEGLFQFPTVIGGV
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Template Sequence  GHITFAASPAIALAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDI. . . DTDLEAQPLYVSDV
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   92.......100.........110.........120.........130.........140.........150.... .....160........
 
   105....110.........120.........130.........140.........150.........160.........170.........180....
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Query Sequence  VLAVNIPGLKSGELVLDGKTLGDIYLGKIKKWDDEAIAKLNPGLKLPSQNIAVVRRADGSGTSFVFTSYLAKVNEEWKNN
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Template Sequence  VIVGQRQHPMANATRL. . . . . . . . . . . . . . . . AE. . . . . . . . . . . . . LQECRWAFSSAPRGPGAIIRNAFA. . . . . . . . .
Template Known Secondary structure  TT
TTTT

SG................GG.............GTTS

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   169170.........180.... .. ...190.........200.........210
 
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Query Sequence  VGTGSTVKWPIGLGGKGNDGIAAFVQRLPGAIGYVEYAYAKQN. . . . NLAYTKLISADGKPVSPTEENFANAAKGADWSK
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Template Sequence  . . . RYGLPEPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNAFKDQLCSIPL. . . . . . . . . . . . . . . . . . . . . . . . . .
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   211........220.........230.........240.........250.........260.
 
   261........270.........280.........290.........300.........
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Query Sequence  TFAQDLTNQKGEDAWPITSTTFILIHKDQKKPEQGTEVLKFFDWAYKTG
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Template Sequence  . . . . . . . . . . . . QDALPNPTIYVLRRHDLPV. . . TPAAAGLIRWIQHHA
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   262.......270.........280 .........290.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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