Job Description P0AG82 Confidence 99.64% Date Thu Jan 5 11:28:24 GMT 2012 Rank 12 Aligned Residues 228 % Identity 18% Template c3muqB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized conserved protein; PDBTitle: the crystal structure of a conserved functionally unknown protein from2 vibrio parahaemolyticus rimd 2210633 Resolution 2.05 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.
Predicted Secondary structure															.	.																																																										.	.
Query SS confidence															.	.																																																										.	.
Query Sequence		A	S	L	T	G	A	G	A	T	F	P	A	P	.	.	V	Y	A	K	W	A	D	T	Y	Q	K	E	T	G	N	K	V	N	Y	Q	G	I	G	S	S	G	G	V	K	Q	I	I	A	N	T	V	D	F	G	A	S	D	A	P	L	S	D	E	K	L	A	Q	E	G	L	F	Q	.	.	F	P	T	V	I	G
Query Conservation															.	.																																																										.	.
Alig confidence															.	.																																																										.	.
Template Conservation
Template Sequence		E	H	V	R	L	A	T	T	T	S	T	Y	H	S	G	L	L	D	Y	L	L	P	Q	F	E	K	D	T	G	Y	K	V	D	V	I	A	A	G	T	G	K	A	L	K	X	G	E	N	G	D	V	D	L	V	X	T	H	A	P	K	A	E	G	T	F	V	E	K	G	Y	G	V	L	P	R	K	L	X	Y	N
Template Known Secondary structure																T	G	G	G	G	T																												T	T	S	S	S																T	T	S
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	V	L	A	V	N	I	P	G	L	K	S	G	E	L	V	L	D	G	K	T	L	G	D	I	Y	L	G	K	I	K	K	W	D	D	E	A	I	A	K	L	N	P	G	L	K	L	P	S	Q	N	I	A	V	V	R	R	A	D	G	S	G	T	S	F	V	F	T	S	Y	L	A	K	V	N	E	E	W	K
Query Conservation
Alig confidence									.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation									.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Sequence		D	F	V	I	V	G	P	.	.	.	K	A	D	P	A	K	I	K	D	D	E	S	V	L	D	V	F	K	E	I	A	N	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	F	I	S	R	G	D	D	S	G	T	H	K	K	E	X	G	F	W	A	Q	T	K	.	.	.	.
Template Known Secondary structure									.	.	.	T	T		T	T			T	T		S												T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S		S														T	.	.	.	.
Template Predicted Secondary structure									.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	V	G	T	G	S	T	V	K	W	P	I	G	L	G	G	K	G	N	D	G	I	A	A	F	V	Q	R	L	P	G	A	I	G	Y	V	E	Y	A	Y	A	K	Q	N	N	L	A	Y	T	K	L	I	S	A	D	G	K	P	V	S	P	T	E	E	N	F	A	N	A	A	K	G	A	D	W	S	K	T	F
Query Conservation
Alig confidence		.	.	.	.	.																																																.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																																.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	I	E	P	N	F	G	G	Y	R	S	V	G	Q	G	X	G	P	T	L	N	X	A	S	E	X	Q	G	Y	T	X	S	D	R	G	T	W	L	A	Y	Q	N	K	L	D	L	E	I	.	.	.	.	.	.	.	L	F	Q	G	D	E	K	L	F	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.					S	T	T																			T														G	G	G		S				.	.	.	.	.	.	.						G	G	G		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.																																																.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.								.	210	.	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		A	Q	D	L	T	N	Q	K	G	E	D	A	W	P	I	T	S	T	T	F	I	L	I	H	K	D	Q	K	K	P	E	Q	G	T	E	V	L	K	F	F	D	W	A	Y	K	.	T	G	A	K	Q	A	N	D	L	D	Y
Query Conservation																																															.
Alig confidence		.	.	.	.	.	.	.	.	.	.							.	.	.	.	.																									.
Template Conservation		.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	N	P	Y	Q	V	I	.	.	.	.	.	L	V	N	P	E	R	Y	P	T	I	N	Y	Q	G	A	K	A	F	S	D	W	L	V	N	P	R	G	Q	E	L	I	N	G	F	R	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.							.	.	.	.	.				T	T	T		T	T	S														S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Template SS confidence
												218	.	220	.	.	.						.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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