Job Description P0AG82 Confidence 75.27% Date Thu Jan 5 11:28:24 GMT 2012 Rank 66 Aligned Residues 247 % Identity 14% Template c3k02A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:acarbose/maltose binding protein gach; PDBTitle: crystal structures of the gach receptor of streptomyces glaucescens2 gla.o in the unliganded form and in complex with acarbose and an3 acarbose homolog. comparison with acarbose-loaded maltose binding4 protein of salmonella typhimurium. Resolution 1.55 Å

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		26	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.							.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure								.	.																		.																								.	.	.	.	.	.																					.	.	.	.	.
Query SS confidence								.	.																		.																								.	.	.	.	.	.																					.	.	.	.	.
Query Sequence		E	A	S	L	T	G	.	.	A	G	A	T	F	P	A	P	V	Y	A	K	W	A	D	T	Y	.	Q	K	E	T	G	N	K	V	N	Y	Q	G	I	G	S	S	G	G	V	K	Q	I	I	.	.	.	.	.	.	A	N	T	V	D	F	G	A	S	D	A	P	L	S	D	E	K	L	A	Q	.	.	.	.	.
Query Conservation								.	.																		.																								.	.	.	.	.	.																					.	.	.	.	.
Alig confidence								.	.																		.																								.	.	.	.	.	.																					.	.	.	.	.
Template Conservation
Template Sequence		S	G	T	V	T	F	W	D	T	S	N	E	A	E	K	A	T	Y	Q	A	L	A	E	G	F	E	K	E	H	P	K	V	D	V	K	Y	V	N	V	P	F	G	E	A	N	A	K	F	K	N	A	A	G	G	N	S	G	A	P	D	V	M	R	T	E	V	A	W	V	A	D	F	A	S	I	G	Y	L	A	P
Template Known Secondary structure													T	T	T																T	T																							T	T	S	S			S						T	T								T	T		B
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
																										92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.						.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	L	F	Q	F	P	T	V	I	G	G	V	V	L	A	V	N	I	P	.	.	.	.	.	G	L	K	S	G	E	L	V	L	D	G	K	T	L	G	D	I	Y	L	G	K	I	K	K	W	D	D	E	A	I	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	G	T	P	A	L	D	D	G	S	D	H	L	P	Q	A	A	A	S	T	R	Y	E	G	K	T	Y	A	V	P	Q	V	I	D	T	L	A	L	F	Y	N	K	E	L	L	T	K	A	G	V	E	V	P	G	S	V	A	E	L	K	T	A	A	A	E	I	T	E	K	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	S	T	T		S	S	G	G	G	B							T	T			T	T																									T					S	B															.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.																			.	.	.	200	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	N	P	G	L	K	L	P	S	Q	N	I	A	V	V	R	R	A	D	G	S	G	T	S	F	V	F	T	S	Y	L	A	K	V	N	E	E	W	K	N	N	V	G	T	G	S	T	V	K	W	P	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	G	K	G	N	D	G
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																				.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																				.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	T	G	A	T	G	L	Y	L	R	G	D	D	P	Y	W	F	L	P	Y	.	.	.	L	Y	G	E	G	G	D	L	V	D	E	K	N	K	T	V	T	V	D	D	E	A	G	V	R	A	Y	R	V	I	K	D	L	V	D	S	K	A	A	I	T	D	A	S	D	G	W	N	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.		S									S		G	G	G	G				.	.	.				T	T			S			T	T	T	T				T	T	S																T	T	S					S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																				.	.	.
Template SS confidence
											169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	A	F	V	Q	R	L	P	G	A	I	G	Y	V	E	Y	A	Y	A	K	Q	N	N	L	A	Y	T	K	L	I	S	A	D	G	K	P	V	S	P	T	E	E	N	F	A	N	A	A	K	G	A	D	W	S	K	T	F	A	Q	D	L	T	N	Q	K	G	E	D	A	W	P	I	T	S	T	T	F	I	L
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	Q	N	A	F	K	S	G	K	V	A	M	M	V	N	G	P	W	A	I	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	A	G	A	R	F	K	D	A	G	N	L	G	V	A	P	V	P	A	G	S	A	G	Q	G	S	P	Q	G	G	W	N	L	S
Template Known Secondary structure								T	T	S								G	G	G				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	S	G	G	G	S	S	G	G	G								B		S	S					B
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.																								.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.		.	.	.	.	.	.	.	.	320
Predicted Secondary structure																									.					.
Query SS confidence																									.					.
Query Sequence		I	H	K	D	Q	K	K	P	E	Q	G	T	E	V	L	K	F	F	D	W	A	Y	K	.	T	G	A	K	.	Q	A	N	D	L	D	Y	A	S
Query Conservation																									.					.
Alig confidence													.	.	.										.					.
Template Conservation													.	.	.
Template Sequence		V	Y	A	G	S	K	N	L	D	A	S	.	.	.	Y	A	F	V	K	Y	M	S	S	A	K	V	Q	Q	Q	T	T	E	K	L	S	L	L	P
Template Known Secondary structure			B	T	T		S						.	.	.								T	S
Template Predicted Secondary structure													.	.	.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.				.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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