 |
Job Description | P0AG82 | Confidence | 89.30% | Date | Thu Jan 5 11:28:24 GMT 2012 |
Rank | 57 | Aligned Residues | 72 |
% Identity | 8% | Template | c3fd3A_ |
PDB info |
PDB header:transcription regulator | Chain: A: PDB Molecule:chromosome replication initiation inhibitor protein; |
PDBTitle: structure of the c-terminal domains of a lysr family protein from2 agrobacterium tumefaciens str. c58.
|
Resolution | 1.70 Å |
|
 |
  |   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | G | A | G | A | T | F | P | A | P | V | Y | A | K | W | A | D | T | Y | Q | K | E | T | G | N | K | V | N | Y | Q | G | I | G | S | S | G | G | V | K | Q | I | I | A | N | T | V | D | F | G | A | S | D | A | P | L | S | D | E | K | L | A | Q | E | G | L | F | Q | F | P | T | V | I |
Query Conservation |   |
  |   |   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|   |
|
|   |   |   |   |   |
|   |   |
|
|
|   |
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
I | A | T | N | A | D | S | L | G | T | W | F | L | D | A | V | S | K | F | T | G | G | S | D | Y | L | V | N | I | A | V | D | D | Q | D | H | T | V | E | W | L | R | G | G | R | V | L | A | A | V | T | A | H | D | K | P | V | Q | G | C | R | V | T | P | L | G | V | L | R | Y | H | A |
Template Known Secondary structure |   |
 |  |  |
|  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  |  | T | S | S |
|  |  |  |  |  |  |
|
| S | S |
|  |  |  |  |  |  | T | T | S |
| S |  |  |  |  | S |
|
| S |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|