Job Description P0AG82 Confidence 25.59% Date Thu Jan 5 11:28:24 GMT 2012
Rank 105 Aligned Residues 98
% Identity 8% Template c3e4rA_
PDB info
PDB header: transport proteinChain: A: PDB Molecule: nitrate transport protein;
PDBTitle: crystal structure of the alkanesulfonate binding protein2 (ssua) from the phytopathogenic bacteria xanthomonas3 axonopodis pv. citri bound to hepes
Resolution 2.01 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
23 . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . .
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. . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . .
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
V F A E A S L T G A G A T F P A P V Y A K W A D T Y Q K E T .
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G N K V N .
Y Q G I G S S G G V K Q I I A N T V D F G A S D A P L S D E K L A Q E G L F Q F P T
Query Conservation  
                                                . .         .                                                      
Alig confidence  
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Template Conservation  
                                                                                                                           
Template Sequence  
A A E P A Q L R I G Y Q K A V S S L V L A K Q H R L L E Q R F P R T K I T W V E F P A G P Q L L E A L N V G S I D L G G A G D I P P L F A Q A A G A D L L Y V G
Template Known Secondary structure  
S T T T T T T S S S T T S S S T T
Template Predicted Secondary structure  
Template SS confidence  
   
25 . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . .
 
   
100 .
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Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
V I .
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G G V V L A V N I P G L K S G E L V L
Query Conservation  
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Alig confidence  
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Template Conservation  
                                     
Template Sequence  
W V P P T P K A E T I L V P S K S A L R T V A D L
Template Known Secondary structure  
G G G T T S G G G G
Template Predicted Secondary structure  
Template SS confidence  
   
105 . . . . 110 . . . . . . . . . 120 . . . . . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]