Job Description P0AG82 Confidence 96.45% Date Thu Jan 5 11:28:24 GMT 2012 Rank 37 Aligned Residues 260 % Identity 16% Template c3cg1A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:upf0100 protein pf0080; PDBTitle: crystal structure of p. furiosus periplasmic binding protein2 moda/wtpa with bound tungstate Resolution 1.60 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.																					.	.																								.
Query SS confidence																														.	.	.	.	.	.																					.	.																								.
Query Sequence		E	A	S	L	T	G	A	G	A	T	F	P	A	P	V	Y	A	K	W	A	D	T	Y	Q	K	E	T	G	.	.	.	.	.	.	N	K	V	N	Y	Q	G	I	G	S	S	G	G	V	K	Q	I	I	A	N	.	.	T	V	D	F	G	A	S	D	A	P	L	S	D	E	K	L	A	Q	E	G	L	F	Q	.
Query Conservation																														.	.	.	.	.	.																					.	.																								.
Alig confidence																														.	.	.	.	.	.																					.	.																								.
Template Conservation
Template Sequence		E	V	T	L	I	V	F	H	A	G	S	L	S	V	P	F	Q	E	V	E	K	E	F	S	E	Y	A	E	R	N	L	G	I	K	V	S	F	Q	D	E	A	S	G	S	V	M	A	V	R	K	V	T	D	L	G	R	K	A	D	V	I	G	V	A	D	Y	T	L	I	P	Q	L	L	I	P	N	Y	T	D	F
Template Known Secondary structure											G	G	G																				S																					T	S					S					S	S	T	T						T	T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
			97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	F	P	T	V	I	G	G	V	V	L	A	V	N	I	P	G	L	K	S	G	E	L	V	L	D	G	K	T	L	G	D	I	Y	L	G	K	I	K	K	W	D	D	E	A	I	A	K	L	N	P	G	L	K	L	P	S	Q	N	I	A	V	V	R	R	A	D	G	S	G	T	S	F	V	F	T	S	Y	L	A
Query Conservation		.
Alig confidence		.														.	.	.					.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.					.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Sequence		Y	V	L	F	A	T	N	E	I	V	I	A	F	T	.	.	.	D	K	S	R	.	.	.	.	.	.	.	Y	V	E	E	M	K	S	N	P	D	K	W	Y	E	.	.	.	.	.	.	.	.	.	I	L	A	R	E	D	V	R	F	G	F	S	D	P	N	Q	D	P	C	G	Y	R	S	L	M	V	I	K	L
Template Known Secondary structure																.	.	.	T	T	S	T	.	.	.	.	.	.	.	T								G	G	G				.	.	.	.	.	.	.	.	.			T	S	T	T								T	T	T
Template Predicted Secondary structure																.	.	.					.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.								130	.	.	.	.	.	.	.	.	.	140	.	.	.										.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		176	.	.	.																				180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	N	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	W	K	N	N	V	G	T	G	S	T	V	K	W	P	I	G	L	G	G	K	G	N	D	G	I	A	A	F	V	Q	R	L	P	G	A	I	G	Y	V	E	Y	A	Y	A	K	Q	N	N	L	A	Y	T	K	L	I	S
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.
Template Conservation																																																																																.	.
Template Sequence		A	D	L	Y	Y	G	K	E	I	F	K	E	L	I	E	E	N	T	N	I	Y	S	N	G	T	Q	I	Y	A	P	K	E	I	T	V	N	P	G	K	I	V	I	R	P	K	E	T	D	L	L	G	L	V	E	S	G	S	I	D	Y	I	F	I	Y	K	S	V	A	K	Q	H	N	L	S	Y	I	T	L	.	.
Template Known Secondary structure							T	S							T	T	T	T	B	S					T	T						S	S			B		T	T	T					S	S	G	G	G	G							T	S	S	S												T	T							.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		A	D	G	K	P	V	S	P	T	E	E	N	F	A	N	A	A	K	G	A	D	W	S	K	T	F	A	Q	D	L	T	N	Q	K	G	E	D	A	W	P	I	T	S	T	T	F	I	L	I	H	K	D	Q	K	K	P	E	Q	G	T	E	V	L	K	F	F	D	W	A	Y	K	.	T	G	A	K	Q	A	N	D
Query Conservation																																																																									.
Alig confidence		.	.	.	.	.	.	.																																									.	.	.	.	.																				.
Template Conservation		.	.	.	.	.	.	.																																									.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	P	S	E	I	N	L	G	D	F	S	K	E	K	F	Y	G	Q	I	S	I	T	L	G	S	T	G	K	T	I	K	A	K	P	I	V	Y	G	V	T	V	.	.	.	.	.	L	K	D	A	P	N	R	E	V	A	I	E	F	L	R	Y	L	L	S	E	N	G	K	R	I	F	E	K
Template Known Secondary structure		.	.	.	.	.	.	.		T	T	T	S	S			G	G	G					T	T						T	T	T																.	.	.	.	.		T	T		T	T													S
Template Predicted Secondary structure		.	.	.	.	.	.	.																																									.	.	.	.	.
Template SS confidence
									251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290						.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		316	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	H	Q
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		319	320	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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