Job Description P0AG82 Confidence 96.98% Date Thu Jan 5 11:28:24 GMT 2012 Rank 33 Aligned Residues 230 % Identity 12% Template c2vozA_ PDB info PDB header:metal-binding protein Chain: A: PDB Molecule:periplasmic iron-binding protein; PDBTitle: apo futa2 from synechocystis pcc6803 Resolution 1.70 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Y	A	K	W	A	D	T	Y	Q	K	E	T	G	N	K	V	N	Y	Q	G	I	G	S	S	G	G	V	K	Q	I	.	.	.	.	I	A	N	T	V	D	F	G	A	S	D	A	P	L	S	D	E	K	L	A	Q	E	G	L	F	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.										.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.
Template Sequence		T	D	D	A	L	Y	D	A	F	G	E	V	N	L	I	E	A	.	.	.	.	.	S	A	E	E	L	I	E	R	I	Q	S	E	G	A	N	S	P	G	D	I	L	F	T	V	D	A	G	M	L	W	R	A	E	Q	A	G	L	F	Q	P	V	R	S	G	K	L	N	E	R	I	P	E	N	L	R	H	P	D
Template Known Secondary structure		T									S								.	.	.	.	.												T	G	G	G				S						S										T	T		B												S		G	G	G	B		T	T
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.						.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
					97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	F	P	T	V	I	G	G	V	V	L	A	V	N	I	P	G	L	K	S	G	E	L	V	L	D	G	K	T	L	G	D	I	Y	L	G	K	I	K	K	W	D	D	E	A	I	A	K	L	N	P	G	L	K	L	P	S	Q	N	I	A	V	V	R	R	A	D	G	S	G	T	S	F	V	F	T	S	Y
Query Conservation		.	.	.
Alig confidence		.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.
Template Sequence		G	L	W	Y	G	F	T	Q	R	A	R	V	L	Y	Y	S	R	D	R	V	N	P	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	T	Y	E	.	.	.	.	.	.	.	.	.	A	L	A	D	P	Q	W	R	G	K	I	L	V	R	P	S	S	N	V	Y	N	L	S	L	T	A	S
Template Known Secondary structure		S	S															T	T	T			G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	G	.	.	.	.	.	.	.	.	.	G	G	G	S	G	G	G	T	T	T						T	T	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.																.	.	.	.	.										150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	K	V	N	E	E	W	K	N	N	V	G	T	G	S	T	V	K	W	P	I	G	L	G	G	K	G	N	D	G	I	A	A	F	V	Q	R	L	P	G	A	I	G	Y	V	E	Y	A	Y	A	K	Q	N	N	L	A	Y	T	K	L	I	S	A	D	G	K	P	V	S	P	T	E	E	N	F	A	N	A	A
Query Conservation
Alig confidence																																																																																.	.
Template Conservation																																																																																.	.
Template Sequence		R	I	A	I	H	G	E	P	E	T	R	R	W	L	Q	G	L	V	G	N	F	A	R	Q	P	E	G	N	D	T	A	Q	I	R	A	I	A	A	G	I	G	D	V	A	I	A	N	S	Y	Y	Y	I	R	L	Q	K	S	T	D	P	A	D	Q	E	V	V	E	K	V	S	L	F	F	P	N	T	G	S	.	.
Template Known Secondary structure																					T	B	S	S	S			S											T	T	S		S																																	S		S	T	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.		.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																																																								.					.
Query SS confidence																																																								.					.
Query Sequence		K	G	A	D	W	S	K	T	F	A	Q	D	L	T	N	Q	K	G	E	D	A	W	P	I	T	S	T	T	F	I	L	I	H	K	D	Q	K	K	P	E	Q	G	T	E	V	L	K	F	F	D	W	A	Y	K	.	T	G	A	K	.	Q	A	N	D	L	D	Y	A	S	L
Query Conservation																																																								.					.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.										.					.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	R	G	T	H	V	N	V	S	G	A	G	V	L	K	N	A	P	N	R	D	A	A	.	.	.	I	A	F	L	E	Y	L	A	S	D	D	A	Q	R	Y	F	A	E	G	N	N	E	Y	P	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S			B										B	T	T		T	T					.	.	.								T	S											T	T				S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template SS confidence
																				255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions