Job Description P0AG82 Confidence 92.49% Date Thu Jan 5 11:28:24 GMT 2012 Rank 50 Aligned Residues 276 % Identity 13% Template c2gh9A_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:maltose/maltodextrin-binding protein; PDBTitle: thermus thermophilus maltotriose binding protein bound with2 maltotriose Resolution 1.95 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.						.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																																.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Query Sequence		E	A	S	L	T	G	A	G	A	T	F	P	A	P	V	Y	A	K	W	A	D	T	Y	Q	K	E	T	G	N	K	V	N	Y	Q	G	I	G	S	S	G	G	V	K	Q	I	I	.	.	.	.	.	A	N	T	V	D	F	G	A	S	D	A	P	L	S	D	E	K	L	A	Q	.	.	.	.	.	.	.	.	.
Query Conservation																																																.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	T	V	W	T	H	F	G	G	P	E	L	E	W	L	K	E	Q	A	R	T	F	E	R	T	S	G	T	K	V	E	V	V	E	V	P	F	A	E	I	K	Q	K	F	I	L	G	A	P	Q	G	Q	A	A	D	L	V	V	T	V	P	H	D	W	V	G	E	M	A	Q	A	G	V	L	E	P	V	G	K
Template Known Secondary structure																											T	T	S																					G	G	G	T		S		S							G	G	G							T	T		B				G	G
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
																							92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	L	F	Q	F	P	T	V	I	G	G	V	V	L	A	V	N	I	P	G	L	K	S	G	E	L	V	L	D	G	K	T	L	G	D	I	Y	L	G	K	I	K	K	W	D	D	E	A	I	A	K	L	N	P	G	L	K	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.																			.							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.																			.							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	V	T	Q	A	Y	L	A	D	L	Q	G	V	A	V	E	A	F	T	F	G	G	R	L	M	G	L	P	A	F	A	E	S	V	A	L	I	Y	N	K	.	.	K	Y	V	K	E	P	P	R	T	W	E	E	F	L	A	L	A	Q	.	K	L	T	T	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	S								B								T			T	T				S														T	.	.	T	T		S	S			S	S										.				S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.																			.							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		P	S	Q	N	I	A	V	V	R	R	A	D	G	S	G	T	S	F	V	F	T	S	Y	L	A	K	V	N	E	E	.	W	K	N	N	V	G	T	G	S	T	V	K	W	P	I	G	L	G	G	K	G	N	D	G	I	A	A	F	V	Q	R	L	P	G	A	I	G	Y	V	E	Y	A	Y	A	K	Q	N	N	L
Query Conservation																																.
Alig confidence		.	.																													.																																															.	.	.
Template Conservation		.	.																																																																												.	.	.
Template Sequence		.	.	T	F	G	F	L	Y	N	I	G	D	P	Y	F	N	F	G	F	F	K	A	F	G	A	E	N	V	F	A	K	D	A	K	G	N	L	D	P	T	K	L	L	I	G	G	E	V	G	E	K	A	L	Q	F	I	K	D	L	R	F	K	Y	N	L	V	P	E	G	V	D	Y	G	V	A	D	G	.	.	.
Template Known Secondary structure		.	.								T	T													T		S	S	S					T	T	T								S	S	S																	T	S			S		T	T									.	.	.
Template Predicted Secondary structure		.	.																																																																												.	.	.
Template SS confidence
				146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		A	Y	T	K	L	I	S	A	D	G	K	P	V	S	P	T	E	E	N	F	A	N	A	A	K	G	A	D	W	S	K	T	F	A	Q	D	L	T	N	Q	K	G	E	D	A	W	P	I	T	S	T	T	F	I	L	I	H	K	D	Q	K	K	P	E	Q	G	T	E	V	L	K	F	F	D	W	A	Y	K	.	T
Query Conservation																																																																																.
Alig confidence		.	.	.																																																																.	.	.										.
Template Conservation		.	.	.																																																																.	.	.
Template Sequence		.	.	.	A	F	K	D	G	A	L	A	M	I	L	N	G	P	W	A	L	G	D	Y	K	K	A	K	V	D	F	G	I	A	P	F	P	V	P	P	G	A	K	N	P	W	G	P	F	L	G	V	Q	G	V	V	V	N	A	Y	S	K	N	K	T	Q	A	.	.	.	V	N	F	A	K	T	L	V	T	G	R
Template Known Secondary structure		.	.	.					T									G	G	G							T	T												T	T		S	S														B	T	T		T	T					.	.	.								T	S
Template Predicted Secondary structure		.	.	.																																																																.	.	.
Template SS confidence
					221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.				.	.	.	.	.	.	290	.	.	.	.
		309	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		G	A	.	K	Q	A	N	D	L	D	Y	A	S	L	P	D	S	V	V	E	Q
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		N	L	V	A	F	N	Q	A	G	G	R	I	P	V	S	K	S	A	V	K	Q
Template Known Secondary structure										S						B
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions