 |
Job Description | P0AA16 | Confidence | 93.67% | Date | Thu Jan 5 11:11:45 GMT 2012 |
Rank | 155 | Aligned Residues | 48 |
% Identity | 13% | Template | d1l3la1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| C-terminal effector domain of the bipartite response regulators
| GerE-like (LuxR/UhpA family of transcriptional regulators)
|
Resolution | 1.66 |
|
  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | L | T | S | G | E | F | A | V | L | K | A | L | V | S | H | P | R | E | P | L | S | R | D | K | L | M | N | L | A | R | G | R | E | Y | S | A | M | E | R | S | I | D | V | Q | I | S | R | L | R | R | M | V | E | E | D | P |
Query Conservation |   |
  |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |
|
|
|   |
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|   |   |
|
|   |   |
|   |   |
|   | . | . | . | . |
|   |   |   |
|
|   |   |
| . | . | . | . | . |   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|
Template Sequence |   |
W | L | D | P | K | E | A | T | Y | L | R | W | I | A | V | G | K | . |
. |
. |
. |
T | X | E | E | I | A | D | V | E | . |
. |
. |
. |
. |
G | V | K | Y | N | S | V | R | V | K | L | R | E | A | X | K | R | F | D | V | R | S |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  | T | T | T |
| . | . | . | . |
|  |  |  |  |  |  |  |  | . | . | . | . | . | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . |
|  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | |
|
|
|
190 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|