Return to main results Retrieve Phyre Job Id

Job DescriptionP0AA16
Confidence61.52%DateThu Jan 5 11:11:45 GMT 2012
Rank249Aligned Residues125
% Identity10%Templatec3i09A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:periplasmic branched-chain amino acid-binding protein; PDBTitle: crystal structure of a periplasmic binding protein (bma2936) from2 burkholderia mallei at 1.80 a resolution
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  KILVVDDD. . . . MRLRALLERYLTEQGFQVRS. . . . . . . VANAEQMDRLLTRESFHLMVLDLMLPGEDGLSICRRLRSQS
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Template Sequence  TWFFLTADYAFGKALEKNTADVVKANGGKVLGEVRHPLSASDFSSFLLQAQSSKAQILGLA. . NAGGDTVNAIKAAKEFG
Template Known Secondary structure  SSTT

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Query Sequence  NPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRRQANELPGAPS
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Template Sequence  ITKTXKLAALLXFINDVHALGLETTQGLVLTDSWYWNRDQASRQWAQRYFAKXKKXPS
Template Known Secondary structure  GGGT
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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