Return to main results Retrieve Phyre Job Id

Job DescriptionP0AA16
Confidence99.82%DateThu Jan 5 11:11:45 GMT 2012
Rank93Aligned Residues111
% Identity26%Templatec3eodA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:protein hnr; PDBTitle: crystal structure of n-terminal domain of e. coli rssb
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  NYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVT
Query Conservation    







      
   
   
  
  
    


  
     






      
      

       

 

Alig confidence 




















































.....





















Template Conservation    






       
   
   
  
  
    


        
 

 
 ..... 
      
        

  
Template Sequence  GKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDI. . . . . AGLKLLEHIRNRGDQTPVLVIS
Template Known Secondary structure  T

S
TT
S
TT


S

.....

TT



Template Predicted Secondary structure 



















.....







Template SS confidence 















































































   7..10.........20.........30.........40.........50......... 60.........70.........80.
 
   84.....90.........100.........110.........120.
Predicted Secondary structure 

















Query SS confidence 





































Query Sequence  AKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLR
Query Conservation                

 


 

     
   
     
Alig confidence 
























..










Template Conservation            
   

  

 

  .. 
 
 
   
 
Template Sequence  ATENMADIAKALRLGVEDVLLKPVN. . RLREMVFACLY
Template Known Secondary structure 





SS


..
Template Predicted Secondary structure 











..
Template SS confidence 





































   87..90.........100.........110. ........120..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions