Job Description P0AA16 Confidence 82.70% Date Thu Jan 5 11:11:45 GMT 2012 Rank 191 Aligned Residues 75 % Identity 17% Template c3cniA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative abc type-2 transporter; PDBTitle: crystal structure of a domain of a putative abc type-2 transporter2 from thermotoga maritima msb8 Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		K	I	L	V	V	D	.	D	D	M	R	L	R	A	L	L	E	R	Y	L	T	E	Q	G	F	Q	V	R	S	V	A	N	A	E	Q	M	D	R	L	L	T	R	E	S	F	H	L	M	V	L	D	L	M	L	P	G	E	D	G	L	S	I	C	R	R	L	R	S	Q	S	N	P	M	P	I	I	M	V	T	A
Query Conservation								.
Alig confidence								.																																												.	.	.				.	.	.	.
Template Conservation																																																				.	.	.				.	.	.	.
Template Sequence		K	V	A	I	V	R	E	D	T	G	T	I	A	E	L	A	E	K	A	L	G	N	X	V	D	I	V	Y	A	G	S	D	L	K	E	A	E	E	A	V	K	K	E	K	A	P	A	I	I	V	.	.	.	I	P	K	.	.	.	.	G	F	S	Q	S	L	E	S	G	E	K	A	R	L	E	I	V	W	Y	L
Template Known Secondary structure											S												T	S	S							S													T		S					.	.	.			T	.	.	.	.	T								T
Template Predicted Secondary structure																																																				.	.	.				.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		85	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	T
Template Known Secondary structure		S		S
Template Predicted Secondary structure
Template SS confidence
		121	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions