Job Description P0AA16 Confidence 99.88% Date Thu Jan 5 11:11:45 GMT 2012 Rank 45 Aligned Residues 117 % Identity 21% Template c2qr3A_ PDB info PDB header:transcription Chain: A: PDB Molecule:two-component system response regulator; PDBTitle: crystal structure of the n-terminal signal receiver domain of two-2 component system response regulator from bacteroides fragilis Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	L	V	V	D	D	D	M	R	L	R	A	L	L	E	R	Y	L	T	E	Q	G	F	Q	V	R	S	V	A	N	A	E	Q	M	D	R	L	L	T	R	E	S	F	H	L	M	V	L	D	L	M	L	P	G	E	D	G	L	S	I	C	R	R	L	R	S	Q	S	N	P	M	P	I	I	M	V	T	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	I	I	V	D	D	N	K	G	V	L	T	A	V	Q	L	L	L	K	N	H	F	S	K	V	I	T	L	S	S	P	V	S	L	S	T	V	L	R	E	E	N	P	E	V	V	L	L	D	M	N	F	T	S	N	E	G	L	F	W	L	H	E	I	K	R	Q	Y	R	D	L	P	V	V	L	F	T	A	Y
Template Known Secondary structure								S													T	T	T	S	S																		S									T	T	T	T																T	T									G
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	E	V	D	R	I	V	G	L	E	I	G	A	D	D	Y	I	P	K	P	F	N	P	R	E	L	L	A	R	I	R	A	V	L	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	I	D	L	A	V	R	G	I	K	E	G	A	S	D	F	V	V	K	P	W	D	N	Q	K	L	L	E	T	L	L	N	A	A	S	Q
Template Known Secondary structure		G	G										T	T								S															T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions