Job Description P0AA16 Confidence 83.48% Date Thu Jan 5 11:11:45 GMT 2012 Rank 189 Aligned Residues 83 % Identity 16% Template c2q5cA_ PDB info PDB header:transcription Chain: A: PDB Molecule:ntrc family transcriptional regulator; PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum Resolution 1.49 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																															.															.	.
Query SS confidence																															.															.	.
Query Sequence		N	Y	K	I	L	V	V	D	D	D	M	R	L	R	A	L	L	E	R	Y	L	T	E	Q	G	F	Q	V	R	.	S	V	A	N	A	E	Q	M	D	R	L	L	T	R	.	.	E	S	F	H	L	M	V	L	D	L	M	L	P	G	E	D	G	L	S	I	C	R	R	L	R	S	Q	S	N	P	M	P	I	I
Query Conservation																															.															.	.
Alig confidence																															.															.	.									.	.	.	.			.	.	.	.										.	.	.
Template Conservation																																																								.	.	.	.			.	.	.	.										.	.	.
Template Sequence		S	L	K	I	A	L	I	S	Q	N	E	N	L	L	N	L	F	P	K	L	A	L	E	K	N	F	I	P	I	T	K	T	A	S	L	T	R	A	S	K	I	A	F	G	L	Q	D	E	V	D	A	I	I	S	.	.	.	.	R	G	.	.	.	.	A	T	S	D	Y	I	K	K	S	.	.	.	V	S	I	P
Template Known Secondary structure										S																T																					T	T	T		S					.	.	.	.			.	.	.	.								T	T	.	.	.		S	S
Template Predicted Secondary structure																																																								.	.	.	.			.	.	.	.										.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.					.	.	60	.	.	.	.	.	.				.	.	.	70
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	T	A	K	G	E	E	V	D	R	I	V	G	L	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	S	I	K	V	T	R	F	D	T	M	R	A	V	Y	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions