Job Description P0AA16 Confidence 46.59% Date Thu Jan 5 11:11:45 GMT 2012 Rank 310 Aligned Residues 85 % Identity 14% Template c2i2aA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable inorganic polyphosphate/atp-nad kinase 1; PDBTitle: crystal structure of lmnadk1 from listeria monocytogenes Resolution 2.10 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.				.	.
Predicted Secondary structure																								.	.	.	.																																																		.	.	.
Query SS confidence																								.	.	.	.																																																		.	.	.
Query Sequence		Y	K	I	L	V	V	D	D	D	M	R	L	R	A	L	L	E	R	Y	L	T	E	.	.	.	.	Q	G	F	Q	V	R	S	V	A	N	A	E	Q	M	D	R	L	L	T	R	E	S	F	H	L	M	V	L	D	L	M	L	P	G	E	D	G	L	S	I	C	R	R	L	R	S	Q	S	N	.	.	.	P	M
Query Conservation																								.	.	.	.																																																		.	.	.
Alig confidence																								.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.						.												.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.						.
Template Sequence		M	K	Y	M	I	T	S	K	G	D	E	K	S	D	L	L	R	L	N	M	I	A	G	F	G	E	Y	D	M	E	Y	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	P	E	I	V	I	S	.	.	.	.	I	G	G	D	G	.	T	F	L	S	A	F	H	Q	Y	E	E	R	L	D	E	I
Template Known Secondary structure											S															T	T	S	S					S	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		S					.	.	.	.			S			.									T	T	T	S	G	G	G
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.						.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.														.	.	.	.	.	.	40	.					.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	I	M	V	T	A	K	G	E	E	V	D	R	I	V	G	L	E	I	G	A	D	D	Y	I	P	K	P	F	N	P	R	E	L	L	A	R	I	R	A	V	L	R
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Sequence		A	F	I	G	I	H	T	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	L	G	F	Y	A	.	D	W	R	P	A	E	A	D	K	L	V	K	L	L	A	K
Template Known Secondary structure								S	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S			S	S		.				G	G	G
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template SS confidence
		63	.	.	.	.	.	.														70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions