Job Description P0AA16 Confidence 40.64% Date Thu Jan 5 11:11:45 GMT 2012 Rank 346 Aligned Residues 76 % Identity 9% Template c2hteB_ PDB info PDB header:transferase Chain: B: PDB Molecule:spermidine synthase; PDBTitle: the crystal structure of spermidine synthase from p. falciparum in2 complex with 5'-methylthioadenosine Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.						.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.							.
Query SS confidence																							.	.	.	.	.							.
Query Sequence		K	I	L	V	V	D	D	D	M	R	L	R	A	L	L	E	R	Y	L	T	E	.	.	.	.	.	Q	G	F	Q	V	R	.	S	V	A	N	A	E	Q	M	D	R	L	L	T	R	E	S	F	H	L	M	V	L	D	L	M	L	P	G	E	D	G	L	S	I	C	R	R	L	R	S	Q	S	N	P	M	P	I
Query Conservation																							.	.	.	.	.							.
Alig confidence																							.	.	.	.	.							.												.																	.	.	.	.
Template Conservation																																														.																	.	.	.	.
Template Sequence		N	I	D	I	C	E	I	D	E	T	V	I	E	V	S	K	I	Y	F	K	N	I	S	C	G	Y	E	D	K	R	V	N	V	F	I	E	D	A	S	K	F	L	E	N	.	V	T	N	T	Y	D	V	I	I	V	D	S	S	D	N	Q	.	.	.	.	N	F	Y	E	K	I	Y	N	A	L	K	P	N	G	Y
Template Known Secondary structure								S																	G	G	G	G	S	T	T						S								T	.			S														.	.	.	.
Template Predicted Secondary structure																																														.																	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	V	T	A	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	V	A	Q	C	E	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions