Return to main results Retrieve Phyre Job Id

Job DescriptionP0AA16
Confidence99.91%DateThu Jan 5 11:11:45 GMT 2012
Rank14Aligned Residues119
% Identity35%Templatec1w25B_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:stalked-cell differentiation controlling protein; PDBTitle: response regulator pled in complex with c-digmp
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.. .......80...
Predicted Secondary structure 





















..





Query SS confidence 


































































. .










Query Sequence  KILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPGEDGLSICRRLRS. . QSNPMPIIMVT
Query Conservation 







      
   
   
  
  
    


  
     






      
      

 ..      

 

Alig confidence 


































































..










Template Conservation 






       
   
   
  
  
    


        



 
  

  

      

        


 

Template Sequence  RILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLIT
Template Known Secondary structure 
SSTTTT
SS

SS

SSS
STTTTTS
Template Predicted Secondary structure 


























Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   84.....90.........100.........110.........120....
Predicted Secondary structure 

















Query SS confidence 








































Query Sequence  AKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRRQA
Query Conservation                

 


 

     
   
        
Alig confidence 








































Template Conservation            
   
   

 

     
   
        
Template Sequence  ALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTRFKL
Template Known Secondary structure 
SS
T

SS

Template Predicted Secondary structure 




























Template SS confidence 








































   84.....90.........100.........110.........120....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions