Job Description P0AA16 Confidence 32.44% Date Thu Jan 5 11:11:45 GMT 2012 Rank 401 Aligned Residues 96 % Identity 10% Template c1j8yF_ PDB info PDB header:signaling protein Chain: F: PDB Molecule:signal recognition 54 kda protein; PDBTitle: signal recognition particle conserved gtpase domain from a.2 ambivalens t112a mutant Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.								.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure													.	.	.																								.	.	.	.	.	.	.																						.	.
Query SS confidence													.	.	.																								.	.	.	.	.	.	.																						.	.
Query Sequence		E	N	Y	K	I	L	V	V	D	D	D	.	.	.	M	R	L	R	A	L	L	E	R	Y	L	T	E	Q	G	F	Q	V	R	S	V	A	N	.	.	.	.	.	.	.	A	E	Q	M	D	R	L	L	T	R	E	S	F	H	L	M	V	L	D	L	M	.	.	L	P	G	E	D	G	L	S	I	C	R	R	L
Query Conservation													.	.	.																								.	.	.	.	.	.	.																						.	.
Alig confidence													.	.	.																								.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		K	G	F	K	V	G	L	V	G	A	D	V	Y	R	P	A	A	L	E	Q	L	Q	Q	L	G	Q	Q	I	G	V	P	V	Y	G	E	P	G	E	K	D	V	V	G	I	A	K	R	G	V	E	K	F	L	S	E	K	M	E	I	I	I	V	D	T	A	G	R	H	G	Y	G	E	E	A	A	L	L	E	E	M
Template Known Secondary structure		T	T											S	S															T							T	T																		T	T		S									S			T	T
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		71	.					.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.
Query SS confidence				.	.	.	.
Query Sequence		R	S	.	.	.	.	Q	S	N	P	M	P	I	I	M	V	T	A	K	G	E	E	V	D	R	I	V	G	L	E	I	G
Query Conservation				.	.	.	.
Alig confidence				.	.	.	.
Template Conservation
Template Sequence		K	N	I	Y	E	A	I	K	P	D	E	V	T	L	V	I	D	A	S	I	G	Q	K	A	Y	D	L	A	S	K	F	N
Template Known Secondary structure											S								G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions