Job Description P0AA16 Confidence 94.99% Date Thu Jan 5 11:11:45 GMT 2012 Rank 147 Aligned Residues 52 % Identity 12% Template c1h0mD_ PDB info PDB header:transcription/dna Chain: D: PDB Molecule:transcriptional activator protein trar; PDBTitle: three-dimensional structure of the quorum sensing protein2 trar bound to its autoinducer and to its target dna Resolution 3.0 Å

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		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	P	M	P	L	T	S	G	E	F	A	V	L	K	A	L	V	S	H	P	R	E	P	L	S	R	D	K	L	M	N	L	A	R	G	R	E	Y	S	A	M	E	R	S	I	D	V	Q	I	S	R	L	R	R	M	V	E	E	D	P
Query Conservation
Alig confidence																							.	.	.	.										.	.	.	.	.
Template Conservation																							.	.	.	.										.	.	.	.	.
Template Sequence		E	D	A	A	W	L	D	P	K	E	A	T	Y	L	R	W	I	A	V	G	K	.	.	.	.	T	X	E	E	I	A	D	V	E	.	.	.	.	.	G	V	K	Y	N	S	V	R	V	K	L	R	E	A	X	K	R	F	D	V	R	S
Template Known Secondary structure		B																	T	T	T		.	.	.	.									T	.	.	.	.	.	T																		T		S	S
Template Predicted Secondary structure																							.	.	.	.										.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.						.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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