Job Description P25526 Confidence 100.00% Date Thu Jan 5 11:41:57 GMT 2012 Rank 22 Aligned Residues 473 % Identity 36% Template c3r31A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:betaine aldehyde dehydrogenase; PDBTitle: crystal structure of betaine aldehyde dehydrogenase from agrobacterium2 tumefaciens Resolution 2.15 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	F	R	Q	Q	A	L	I	N	G	E	W	L	D	A	N	N	G	E	A	I	D	V	T	N	P	A	N	G	D	K	L	G	S	V	P	K	M	G	A	D	E	T	R	A	A	I	D	A	A	N	R	A	L	P	A	W	R	A	L	T	A	K	E	R	A	T	I	L	R	N	W	F	N	L	M	M	E	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	P	K	A	S	H	F	I	D	G	D	Y	V	E	D	N	T	G	T	P	F	E	S	I	F	P	A	T	G	E	M	I	A	K	L	H	A	A	T	P	A	I	V	E	R	A	I	A	S	A	K	R	A	Q	K	E	W	A	A	M	S	P	M	A	R	G	R	I	L	K	R	A	A	D	I	M	R	E	R
Template Known Secondary structure		T			S	S	S				T	T						T	T	S								T	T	T																																S																			T
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		Q	D	D	L	A	R	L	M	T	L	E	Q	G	K	P	L	A	E	A	.	K	G	E	I	S	Y	A	A	S	F	I	E	W	F	A	E	E	G	K	R	I	Y	G	D	T	I	P	G	H	Q	A	D	K	R	L	I	V	I	K	Q	P	I	G	V	T	A	A	I	T	P	W	N	F	P	A	A	M	I	T	R
Query Conservation																					.
Alig confidence																					.																														.
Template Conservation																																																			.
Template Sequence		N	D	A	L	S	T	L	E	T	L	D	T	G	K	P	I	Q	E	T	I	V	A	D	P	T	S	G	A	D	A	F	E	F	F	G	G	I	A	P	S	A	L	N	G	D	Y	I	P	L	.	G	G	D	F	A	Y	T	K	R	V	P	L	G	V	C	V	G	I	G	A	W	N	Y	P	Q	Q	I	A	C	W
Template Known Secondary structure																								S																			T								.	S	S	S										S								S	S	S
Template Predicted Secondary structure																																																			.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	G	P	A	L	A	A	G	C	T	M	V	L	K	P	A	S	Q	T	P	F	S	A	L	A	L	A	E	L	A	I	R	A	G	V	P	A	G	V	F	N	V	V	T	G	S	A	G	A	V	G	N	E	L	T	S	N	P	L	V	R	K	L	S	F	T	G	S	T	E	I	G	R	Q	L	M	E	Q	C
Query Conservation
Alig confidence																																																		.
Template Conservation																																																		.
Template Sequence		K	A	A	P	A	L	V	A	G	N	A	M	V	F	K	P	S	E	N	T	P	L	G	A	L	K	I	A	E	I	L	I	E	A	G	L	P	K	G	L	F	N	V	I	Q	G	D	R	.	D	T	G	P	L	L	V	N	H	P	D	V	A	K	V	S	L	T	G	S	V	P	T	G	R	K	V	A	A	A	A
Template Known Secondary structure									T	T									T	T	S		S												T	T			T	T	S								T	.	T							T		T	T								S
Template Predicted Secondary structure																																																		.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	D	I	K	K	V	S	L	E	L	G	G	N	A	P	F	I	V	F	D	D	A	D	L	D	K	A	V	E	G	A	L	A	S	K	F	R	N	A	G	Q	T	C	V	C	A	N	R	L	Y	V	Q	D	G	V	Y	D	R	F	A	E	K	L	Q	Q	A	V	S	K	L	H	I	G	D	G	L	D	N	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	H	L	K	H	V	T	M	E	L	G	G	K	S	P	M	I	V	F	D	D	A	D	I	E	S	A	V	G	G	A	M	L	G	N	F	Y	S	S	G	Q	V	C	S	N	G	T	R	V	F	V	Q	K	K	A	K	A	R	F	L	E	N	L	K	R	R	T	E	A	M	I	L	G	D	P	L	D	Y	A
Template Known Secondary structure				T	T																	T	T	S														T	S							T	T								G	G	G																	B			T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.				.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure																																									.	.	.
Query SS confidence																																									.	.	.
Query Sequence		V	T	I	G	P	L	I	D	E	K	A	V	A	K	V	E	E	H	I	A	D	A	L	E	K	G	A	R	V	V	C	G	G	K	A	H	E	R	G	.	.	.	G	N	F	F	Q	P	T	I	L	V	D	V	P	A	N	A	K	V	S	K	E	E	T	F	G	P	L	A	P	L	F	R	F	K	D	E	A	D
Query Conservation																																									.	.	.
Alig confidence																																									.	.	.
Template Conservation
Template Sequence		T	H	L	G	P	L	V	S	K	A	Q	Q	E	K	V	L	S	Y	I	E	K	G	K	A	E	G	A	T	L	I	T	G	G	G	I	P	N	N	V	A	G	E	G	A	Y	V	Q	P	T	V	F	A	D	V	T	D	D	M	T	I	A	R	E	E	I	F	G	P	V	M	C	V	L	D	F	D	D	E	D	E
Template Known Secondary structure			S	B			B	S																			T								S			S	S			S	S	S	B												T	T	S					S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	A	Q	A	N	D	T	E	F	G	L	A	A	Y	F	Y	A	R	D	L	S	R	V	F	R	V	G	E	A	L	E	Y	G	I	V	G	I	N	T	G	I	I	S	N	E	V	A	P	F	G	G	I	K	A	S	G	L	G	R	E	G	S	K	Y	G	I	E	D	Y	L	E	I	K	Y	M	C	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	A	R	A	N	A	T	E	F	G	L	A	G	G	V	F	T	A	D	L	A	R	A	H	R	V	V	D	G	L	E	A	G	T	L	W	I	N	T	Y	N	L	C	P	V	E	I	P	F	G	G	S	K	Q	S	G	F	G	R	E	N	S	A	A	A	L	E	H	Y	S	E	L	K	T	V	Y	V	S
Template Known Secondary structure									S	S			S							S												S			S					S	S						T	T	S		B					T	T					B	S	T	G	G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.