Job Description P25526 Confidence 100.00% Date Thu Jan 5 11:41:57 GMT 2012 Rank 26 Aligned Residues 469 % Identity 37% Template c3prlD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:nadp-dependent glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: crystal structure of nadp-dependent glyceraldehyde-3-phosphate2 dehydrogenase from bacillus halodurans c-125 Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	R	Q	Q	A	L	I	N	G	E	W	L	D	A	N	N	G	E	A	I	D	V	T	N	P	A	N	G	D	K	L	G	S	V	P	K	M	G	A	D	E	T	R	A	A	I	D	A	A	N	R	A	L	P	A	W	R	A	L	T	A	K	E	R	A	T	I	L	R	N	W	F	N	L	M	M	E	H	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	F	N	A	N	I	L	R	N	G	E	W	V	E	S	R	T	G	E	R	I	S	I	S	A	P	A	S	G	V	A	L	G	S	I	P	A	L	S	Q	E	E	V	N	D	A	I	Q	G	A	K	D	A	Q	K	I	W	K	I	R	P	I	H	E	R	V	D	L	L	Y	A	W	A	D	L	L	E	E	R	K
Template Known Secondary structure										T	T						T	T									T	T	T																														T	T	S																			T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																																		.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.
Query Sequence		D	D	L	A	R	L	M	T	L	E	Q	G	K	P	L	A	E	A	K	G	E	I	S	Y	A	A	S	F	I	E	W	F	A	E	E	G	K	R	I	Y	G	D	T	I	P	G	H	Q	.	.	.	.	.	A	D	K	R	L	I	V	I	K	Q	P	I	G	V	T	A	A	I	T	P	W	N	F	P	A	A	M
Query Conservation																																																		.	.	.	.	.
Alig confidence																																																		.	.	.	.	.
Template Conservation
Template Sequence		E	I	I	G	E	L	I	M	H	E	V	A	K	P	K	K	S	A	I	G	E	V	S	R	T	A	D	I	I	R	H	T	A	D	E	A	L	R	L	N	G	E	T	L	K	G	D	Q	F	K	G	G	S	S	K	K	I	A	L	V	E	R	E	P	L	G	V	V	L	A	I	S	P	F	N	Y	P	V	N	L
Template Known Secondary structure												S																										T	T								G	G	G	S	T	T			T	T											S								S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	R	K	A	G	P	A	L	A	A	G	C	T	M	V	L	K	P	A	S	Q	T	P	F	S	A	L	A	L	A	E	L	A	I	R	A	G	V	P	A	G	V	F	N	V	V	T	G	S	A	G	A	V	G	N	E	L	T	S	N	P	L	V	R	K	L	S	F	T	G	S	T	E	I	G	R	Q	L	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	A	K	I	A	P	A	L	V	T	G	N	T	V	V	F	K	P	A	T	Q	G	S	L	S	G	I	K	M	V	E	A	L	A	D	A	G	A	P	E	G	I	I	Q	V	V	T	G	R	G	S	V	I	G	D	H	L	V	E	H	P	G	I	D	M	I	T	F	T	G	G	T	T	T	G	E	R	I	S
Template Known Secondary structure												T	T									S	T	T														T	T			T	T	S								S	S	S	S						T		T	T								S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	C	A	K	D	I	K	K	V	S	L	E	L	G	G	N	A	P	F	I	V	F	D	D	A	D	L	D	K	A	V	E	G	A	L	A	S	K	F	R	N	A	G	Q	T	C	V	C	A	N	R	L	Y	V	Q	D	G	V	Y	D	R	F	A	E	K	L	Q	Q	A	V	S	K	L	H	I	G	D	G	L
Query Conservation
Alig confidence					.	.																																																																											.
Template Conservation					.	.																																																																											.
Template Sequence		E	K	A	.	.	K	M	I	P	V	V	L	E	L	G	G	K	D	P	A	I	V	L	D	D	A	D	L	K	L	T	A	S	Q	I	V	S	G	A	F	S	Y	S	G	Q	R	C	T	A	I	K	R	V	F	V	Q	D	S	V	A	D	Q	L	V	A	N	I	K	E	L	V	E	Q	L	T	V	G	S	P	.
Template Known Secondary structure					.	.		S	S																T	T																G	G	G	G			S	S	S																							T	T			B	S		G	.
Template Predicted Secondary structure					.	.																																																																											.
Template SS confidence
		249	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	G	V	T	I	G	P	L	I	D	E	K	A	V	A	K	V	E	E	H	I	A	D	A	L	E	K	G	A	R	V	V	C	G	G	K	A	H	E	R	G	G	N	F	F	Q	P	T	I	L	V	D	V	P	A	N	A	K	V	S	K	E	E	T	F	G	P	L	A	P	L	F	R	F	K	D	E	A	D
Query Conservation
Alig confidence																																							.	.	.
Template Conservation																																							.	.	.
Template Sequence		E	D	D	A	D	I	T	P	V	I	D	E	K	S	A	A	F	I	Q	G	L	I	D	D	A	L	E	N	G	A	T	L	L	S	G	N	K	.	.	.	R	Q	G	N	L	L	S	P	T	L	L	D	D	V	T	P	A	M	R	V	A	W	E	E	P	F	G	P	V	L	P	I	I	R	V	K	D	A	N	E
Template Known Secondary structure		G	G	T		S	B				S																		T	T									.	.	.			T	T									S			T	T	S	G	G	G	T	S				S	S								S	S
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.				.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.		.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		V	I	A	Q	A	N	D	T	E	F	G	L	A	A	Y	F	Y	A	R	D	L	S	R	V	F	R	V	G	E	A	L	E	Y	G	I	V	G	I	N	T	G	I	I	S	N	.	E	V	A	P	F	G	G	I	K	A	S	G	L	G	R	E	G	S	K	Y	G	I	E	D	Y	L	E	I	K	Y	M	C	I	G
Query Conservation																																															.
Alig confidence																																															.
Template Conservation
Template Sequence		A	I	S	L	S	N	Q	S	D	Y	G	L	Q	A	S	I	F	T	K	D	T	D	R	A	I	N	I	G	K	H	L	E	V	G	T	V	H	I	N	A	K	T	E	R	G	P	D	H	F	P	F	L	G	V	K	K	S	G	L	G	V	Q	G	I	K	P	S	L	L	S	M	T	R	E	R	V	T	V	L	N
Template Known Secondary structure									S	S			S							S											T	S		S	S					S	S				S		S	T	T	S		B				G	G	G			S		B	S								T
Template Predicted Secondary structure
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
		482
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		483