Return to main results Retrieve Phyre Job Id

Job DescriptionP25526
Confidence34.62%DateThu Jan 5 11:41:57 GMT 2012
Rank53Aligned Residues110
% Identity17%Templatec3oqbF_
PDB info PDB header:oxidoreductaseChain: F: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of putative oxidoreductase from bradyrhizobium2 japonicum usda 110
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   188.190.........200.........210.........220.........230.........240.........250.........260.......
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  SALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDD
Query Conservation 
   
   
  



 
 
  
 
        
     
  
 



   
  
             



    

   
Alig confidence 















.....






....



































.........


Template Conservation    
     
   
   .....   
   ....

    



 
 

   
      

 





 
.........


Template Sequence  SAEKVEALAKRFNIAR. . . . . WTTDLDA. . . . ALADKNDTXFFDAATTQARPGLLTQAINAGKHVYCE. . . . . . . . . KPI
Template Known Secondary structure 
T

.....
S
....
TT


S
TTTTTT

.........S
S
Template Predicted Secondary structure 




.....

....












.........


Template SS confidence 















































































   55....60.........70 ....... ..80.........90.........100.........110... ...
 
   268.270.........280.........290.........300.........310.........320.
Predicted Secondary structure 

















Query SS confidence 





















































Query Sequence  ADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDG
Query Conservation 


  

  

       

 
 
   
 
     
 
   
         
  
Alig confidence 



















......



























Template Conservation 
 
  

  
  

   
  ......  
    
  
     
  
  
 

 
Template Sequence  ATNFEEALEVVKLANSKGVK. . . . . . HGTVQDKLFLPGLKKIAFLRDSGFFGRI
Template Known Secondary structure 
SST

......

GGGGSTTSSSS
Template Predicted Secondary structure 





......










Template SS confidence 





















































   117..120.........130...... ...140.........150.........160....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions