Job Description P25526 Confidence 100.00% Date Thu Jan 5 11:41:57 GMT 2012 Rank 2 Aligned Residues 481 % Identity 66% Template c3ifgH_ PDB info PDB header:oxidoreductase Chain: H: PDB Molecule:succinate-semialdehyde dehydrogenase (nadp+); PDBTitle: crystal structure of succinate-semialdehyde dehydrogenase from2 burkholderia pseudomallei, part 1 of 2 Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	N	D	S	N	L	F	R	Q	Q	A	L	I	N	G	E	W	L	D	A	N	N	G	E	A	I	D	V	T	N	P	A	N	G	D	K	L	G	S	V	P	K	M	G	A	D	E	T	R	A	A	I	D	A	A	N	R	A	L	P	A	W	R	A	L	T	A	K	E	R	A	T	I	L	R	N	W	F	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	M	K	D	P	S	L	L	R	H	Q	A	Y	I	G	G	E	W	Q	A	A	D	S	D	A	T	F	E	V	F	D	P	A	T	G	E	S	L	G	T	V	P	K	M	G	A	A	E	T	A	R	A	I	E	A	A	Q	A	A	W	A	G	W	R	M	K	T	A	K	E	R	A	A	I	L	R	R	W	F	D
Template Known Secondary structure			S	S	S	G	G	G	S			S				T	T						T	T									T	T	T										B																						S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	M	E	H	Q	D	D	L	A	R	L	M	T	L	E	Q	G	K	P	L	A	E	A	K	G	E	I	S	Y	A	A	S	F	I	E	W	F	A	E	E	G	K	R	I	Y	G	D	T	I	P	G	H	Q	A	D	K	R	L	I	V	I	K	Q	P	I	G	V	T	A	A	I	T	P	W	N	F	P	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	I	A	N	S	D	D	L	A	L	I	L	T	T	E	Q	G	K	P	L	A	E	A	K	G	E	I	A	Y	A	A	S	F	I	E	W	F	A	E	E	G	K	R	V	A	G	D	T	L	P	T	P	D	A	N	K	R	I	V	V	V	K	E	P	I	G	V	C	A	A	I	T	P	W	N	F	P	A	A
Template Known Secondary structure						T																																						T	T									S	S	T	T																			S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	T	R	K	A	G	P	A	L	A	A	G	C	T	M	V	L	K	P	A	S	Q	T	P	F	S	A	L	A	L	A	E	L	A	I	R	A	G	V	P	A	G	V	F	N	V	V	T	G	S	A	G	A	V	G	N	E	L	T	S	N	P	L	V	R	K	L	S	F	T	G	S	T	E	I	G	R	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	I	A	R	K	V	G	P	A	L	A	A	G	C	P	I	V	V	K	P	A	E	S	T	P	F	S	A	L	A	M	A	F	L	A	E	R	A	G	V	P	K	G	V	L	S	V	V	I	G	D	P	K	A	I	G	T	E	I	T	S	N	P	I	V	R	K	L	S	F	T	G	S	T	A	V	G	R	L	L
Template Known Secondary structure														T									S	S																T			B	T	T						B													T	T								S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	Q	C	A	K	D	I	K	K	V	S	L	E	L	G	G	N	A	P	F	I	V	F	D	D	A	D	L	D	K	A	V	E	G	A	L	A	S	K	F	R	N	A	G	Q	T	C	V	C	A	N	R	L	Y	V	Q	D	G	V	Y	D	R	F	A	E	K	L	Q	Q	A	V	S	K	L	H	I	G	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	A	Q	S	A	P	T	V	K	K	L	T	L	E	L	G	G	N	A	P	F	I	V	F	D	D	A	D	L	D	A	A	V	E	G	A	I	A	S	K	Y	R	N	N	G	Q	T	C	V	C	T	N	R	F	F	V	H	E	R	V	Y	D	A	F	A	D	K	L	A	A	A	V	S	K	L	K	V	G	R	G
Template Known Secondary structure					T	G	G	G	T																	T	T															S	G	G	G	G		S	T	T									G	G	G														T	S		B			T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	N	G	V	T	I	G	P	L	I	D	E	K	A	V	A	K	V	E	E	H	I	A	D	A	L	E	K	G	A	R	V	V	C	G	G	K	A	H	E	R	G	G	N	F	F	Q	P	T	I	L	V	D	V	P	A	N	A	K	V	S	K	E	E	T	F	G	P	L	A	P	L	F	R	F	K	D	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	S	G	A	T	L	G	P	L	I	N	E	A	A	V	K	K	V	E	S	H	I	A	D	A	L	A	K	G	A	S	L	M	T	G	G	K	R	H	A	L	G	H	G	F	F	E	P	T	V	L	T	G	V	K	P	D	M	D	V	A	K	E	E	T	F	G	P	L	A	P	L	F	R	F	A	S	E	E
Template Known Secondary structure		T	S	T	T			B				S	S																		T								S	B		T	T		T	T		B										T	T	S	G	G	G	T	S				S	S
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	I	A	Q	A	N	D	T	E	F	G	L	A	A	Y	F	Y	A	R	D	L	S	R	V	F	R	V	G	E	A	L	E	Y	G	I	V	G	I	N	T	G	I	I	S	N	E	V	A	P	F	G	G	I	K	A	S	G	L	G	R	E	G	S	K	Y	G	I	E	D	Y	L	E	I	K	Y	M	C	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	V	R	L	A	N	D	T	E	F	G	L	A	A	Y	L	Y	S	R	D	I	G	R	V	W	R	V	A	E	A	L	E	Y	G	M	V	G	I	N	T	G	L	I	S	N	E	V	A	P	F	G	G	V	K	Q	S	G	L	G	R	E	G	S	H	Y	G	I	D	D	Y	V	V	I	K	Y	L	C	V	A
Template Known Secondary structure										S	S			S																						S					S		S					S	S	S		B			S	G	G	G			S		B	S	T	T	T	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
		482
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		484