Job Description P25526 Confidence 100.00% Date Thu Jan 5 11:41:57 GMT 2012 Rank 33 Aligned Residues 441 % Identity 30% Template c3hazA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:proline dehydrogenase; PDBTitle: crystal structure of bifunctional proline utilization a2 (puta) protein Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	D	K	L	G	S	V	P	K	M	G	A	D	E	T	R	A	A	I	D	A	A	N	R	A	L	P	A	W	R	A	L	T	A	K	E	R	A	T	I	L	R	N	W	F	N	L	M	M	E	H	Q	D	D	L	A	R	L	M	T	L	E	Q	G	K	P	L	A	E	A	K	G	E	I	S	Y	A	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	T	G	D	L	K	P	I	A	D	A	T	P	D	Q	A	H	A	A	V	A	A	A	R	A	G	F	A	G	W	S	R	T	P	A	G	I	R	A	A	A	L	E	Q	A	A	H	L	L	E	S	R	S	A	H	F	I	A	L	L	Q	R	E	G	G	K	T	L	D	D	A	L	S	E	L	R	E	A	A	D
Template Known Secondary structure																																	T	S																			T											T	T
Template Predicted Secondary structure
Template SS confidence
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		F	I	E	W	F	A	E	E	G	K	R	I	Y	G	D	T	I	P	G	H	Q	A	.	D	K	R	L	I	V	I	K	Q	P	I	G	V	T	A	A	I	T	P	W	N	F	P	A	A	M	I	T	R	K	A	G	P	A	L	A	A	G	C	T	M	V	L	K	P	A	S	Q	T	P	F	S	A	L	A	L	A
Query Conservation																								.
Alig confidence																								.
Template Conservation
Template Sequence		F	C	R	Y	Y	A	A	Q	G	R	K	L	F	G	S	E	T	A	M	P	G	P	T	G	E	S	N	A	L	T	M	R	G	R	G	V	F	V	A	I	S	P	W	N	F	P	L	A	I	F	L	G	Q	V	T	A	A	L	M	A	G	N	S	V	V	A	K	P	A	E	Q	T	P	R	I	A	R	E	A	V
Template Known Secondary structure															S	S								T	T											S								S	S	S	T	T													T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.				250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																																																										.	.	.
Query SS confidence																																																										.	.	.
Query Sequence		E	L	A	I	R	A	G	V	P	A	G	V	F	N	V	V	T	G	S	A	G	A	V	G	N	E	L	T	S	N	P	L	V	R	K	L	S	F	T	G	S	T	E	I	G	R	Q	L	M	E	Q	C	A	K	D	I	.	.	.	K	K	V	S	L	E	L	G	G	N	A	P	F	I	V	F	D	D	A	D	L
Query Conservation																																																										.	.	.
Alig confidence																						.																																				.	.	.
Template Conservation																						.
Template Sequence		A	L	L	H	E	A	G	I	P	K	S	A	L	Y	L	V	T	G	D	G	.	R	I	G	A	A	L	T	A	H	P	D	I	A	G	V	V	F	T	G	S	T	E	V	A	R	S	I	N	R	A	L	A	A	K	D	G	P	I	V	P	L	I	A	E	T	G	G	I	N	A	M	I	A	D	A	T	A	L	P
Template Known Secondary structure								T			T	T	T									.										T	T								S															S	S	S																			T	T	S
Template Predicted Secondary structure																						.
Template SS confidence
		695	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.		.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	A	V	E	G	A	L	A	S	K	F	R	N	A	G	Q	T	C	V	C	A	N	R	L	Y	V	Q	D	G	V	Y	D	R	F	A	E	K	L	Q	Q	A	V	S	K	L	H	I	G	D	G	L	D	N	G	V	T	I	G	P	L	I	D	E	K	A	V	A	K	V	E	E	H	I	A	D	A	L	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Q	V	A	D	D	V	V	T	S	A	F	R	S	A	G	Q	R	C	S	A	L	R	L	L	F	V	Q	E	D	V	A	D	R	M	I	E	M	V	A	G	A	A	R	E	L	K	I	G	D	P	S	D	V	A	T	H	V	G	P	V	I	D	V	E	A	K	Q	R	L	D	A	H	I	A	R	M	K	T	E
Template Known Secondary structure														G	G	G	G		S	T	T																									T			B	S		T	T	S	T	T		S	B				S
Template Predicted Secondary structure
Template SS confidence
		774	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.			.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		G	A	R	V	V	C	G	G	K	A	H	E	R	G	G	N	F	F	Q	P	T	I	L	V	D	V	P	A	N	A	K	V	S	K	E	E	T	F	G	P	L	A	P	L	F	R	F	.	.	K	D	E	A	D	V	I	A	Q	A	N	D	T	E	F	G	L	A	A	Y	F	Y	A	R	D	L	S	R	V	F	R
Query Conservation																																																	.	.
Alig confidence										.	.	.															.	.																					.	.
Template Conservation										.	.	.															.	.
Template Sequence		A	R	L	H	F	A	G	P	.	.	.	A	P	E	G	C	F	V	A	P	H	I	F	E	L	.	.	T	E	A	G	Q	L	T	E	E	V	F	G	P	I	L	H	V	V	R	Y	R	P	E	N	L	E	R	V	L	R	A	I	E	R	T	G	Y	G	L	T	L	G	V	H	S	R	I	D	D	S	I	E	A
Template Known Secondary structure		S								.	.	.			S	S	S										.	.	S	S	G	G	G			S				S	S									G	G	G											T				S							S
Template Predicted Secondary structure										.	.	.															.	.
Template SS confidence
		854	.	.	.	.	.	860	.				.	.	.	.	.	.	.	.	870	.	.	.	.	.			.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.			.	.	450	.	.	.	.	.	.	.	.	.	460	.		.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure																					.	.															.
Query SS confidence																					.	.															.
Query Sequence		V	G	E	A	L	E	Y	G	I	V	G	I	N	T	G	I	I	S	N	.	.	E	V	A	P	F	G	G	I	K	A	S	G	L	G	.	R	E	G	S	K	Y	G	I	E	D	Y	L	E	I	K	Y	M	C	I	G
Query Conservation																					.	.															.
Alig confidence																					.	.															.
Template Conservation
Template Sequence		I	I	D	R	V	Q	V	G	N	I	Y	V	N	R	N	M	I	G	A	V	V	G	V	Q	P	F	G	G	N	G	L	S	G	T	G	P	K	A	G	G	P	H	Y	L	A	R	F	A	T	E	Q	T	V	T	I	N
Template Known Secondary structure									S					S	S		S					T	T	T	S		B				G	G	G	B					B	T	S	T	T	S	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		929	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.