Job Description P25526 Confidence 100.00% Date Thu Jan 5 11:41:57 GMT 2012 Rank 4 Aligned Residues 476 % Identity 34% Template c3ed6B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:betaine aldehyde dehydrogenase; PDBTitle: 1.7 angstrom resolution crystal structure of betaine aldehyde2 dehydrogenase (betb) from staphylococcus aureus Resolution 1.70 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																											.	.
Query SS confidence																																																											.	.
Query Sequence		N	L	F	R	Q	Q	A	L	I	N	G	E	W	L	D	A	N	N	G	E	A	I	D	V	T	N	P	A	N	G	D	K	L	G	S	V	P	K	M	G	A	D	E	T	R	A	A	I	D	A	A	N	R	A	L	P	A	.	.	W	R	A	L	T	A	K	E	R	A	T	I	L	R	N	W	F	N	L	M	M
Query Conservation																																																											.	.
Alig confidence																																																											.	.
Template Conservation
Template Sequence		K	H	L	S	Q	R	Q	Y	I	D	G	E	W	V	E	S	A	N	K	N	T	R	D	I	I	N	P	Y	N	Q	E	V	I	F	T	V	S	E	G	T	K	E	D	A	E	R	A	I	L	A	A	R	R	A	F	E	S	G	E	W	S	Q	E	T	A	E	T	R	G	K	K	V	R	A	I	A	D	K	I	K
Template Known Secondary structure		T	T				S				T	T						T	T									T	T	T	T																												T	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	Q	D	D	L	A	R	L	M	T	L	E	Q	G	K	P	L	A	E	A	K	G	E	I	S	Y	A	A	S	F	I	E	W	F	A	E	E	G	K	R	I	Y	G	D	T	I	P	G	H	Q	A	D	K	R	L	I	V	I	K	Q	P	I	G	V	T	A	A	I	T	P	W	N	F	P	A	A	M	I	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	H	R	E	A	L	A	R	L	E	T	L	D	T	G	K	T	L	E	E	S	Y	A	D	M	D	D	I	H	N	V	F	M	Y	F	A	G	L	A	D	K	D	G	G	E	M	I	D	S	P	I	P	D	T	E	S	K	I	V	K	E	P	V	G	V	V	T	Q	I	T	P	W	N	Y	P	L	L	Q	A	S
Template Known Secondary structure			T																																					T	T	S									S	S	T	T																			S	S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	A	G	P	A	L	A	A	G	C	T	M	V	L	K	P	A	S	Q	T	P	F	S	A	L	A	L	A	E	L	A	I	R	A	G	V	P	A	G	V	F	N	V	V	T	G	S	A	G	A	V	G	N	E	L	T	S	N	P	L	V	R	K	L	S	F	T	G	S	T	E	I	G	R	Q	L	M	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	K	I	A	P	A	L	A	T	G	C	S	L	V	M	K	P	S	E	I	T	P	L	T	T	I	R	V	F	E	L	M	E	E	V	G	F	P	K	G	T	I	N	L	I	L	G	A	G	S	E	V	G	D	V	M	S	G	H	K	E	V	D	L	V	S	F	T	G	G	I	E	T	G	K	H	I	M	K	N
Template Known Secondary structure											T									T	T																			T	T	S						S			T	T									T	T		S						S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	A	K	D	I	K	K	V	S	L	E	L	G	G	N	A	P	F	I	V	F	D	D	A	D	L	D	K	A	V	E	G	A	L	A	S	K	F	R	N	A	G	Q	T	C	V	C	A	N	R	L	Y	V	Q	D	G	V	Y	D	R	F	A	E	K	L	Q	Q	A	V	S	K	L	H	I	G	D	G	L	D	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	N	N	V	T	N	I	A	L	E	L	G	G	K	N	P	N	I	I	F	D	D	A	D	F	E	L	A	V	D	Q	A	L	N	G	G	Y	F	H	A	G	Q	V	C	S	A	G	S	R	I	L	V	Q	N	S	I	K	D	K	F	E	Q	A	L	I	D	R	V	K	K	I	K	L	G	N	G	F	D	A
Template Known Secondary structure				T	T	T																	T	T	S															G	G	G	G	T	S	T	T																								T	T			B			T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.					.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure																																								.	.	.	.
Query SS confidence																																								.	.	.	.
Query Sequence		G	V	T	I	G	P	L	I	D	E	K	A	V	A	K	V	E	E	H	I	A	D	A	L	E	K	G	A	R	V	V	C	G	G	K	A	H	E	.	.	.	.	R	G	G	N	F	F	Q	P	T	I	L	V	D	V	P	A	N	A	K	V	S	K	E	E	T	F	G	P	L	A	P	L	F	R	F	K	D	E
Query Conservation																																								.	.	.	.
Alig confidence																																								.	.	.	.
Template Conservation
Template Sequence		D	T	E	M	G	P	V	I	S	T	E	H	R	N	K	I	E	S	Y	M	D	V	A	K	A	E	G	A	T	I	A	V	G	G	K	R	P	D	R	D	D	L	K	D	G	L	F	F	E	P	T	V	I	T	N	C	D	T	S	M	R	I	V	Q	E	E	V	F	G	P	V	V	T	V	E	G	F	E	T	E
Template Known Secondary structure		T		S	B				S																			T								S					T	T	T	T	T	S										S			T	T	S					S				S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	V	I	A	Q	A	N	D	T	E	F	G	L	A	A	Y	F	Y	A	R	D	L	S	R	V	F	R	V	G	E	A	L	E	Y	G	I	V	G	I	N	T	G	I	I	S	N	E	V	A	P	F	G	G	I	K	A	S	G	L	G	R	E	G	S	K	Y	G	I	E	D	Y	L	E	I	K	Y	M	C	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	A	I	Q	L	A	N	D	S	I	Y	G	L	A	G	A	V	F	S	K	D	I	G	K	A	Q	R	V	A	N	K	L	K	L	G	T	V	W	I	N	D	F	H	P	Y	F	A	Q	A	P	W	G	G	Y	K	Q	S	G	I	G	R	E	L	G	K	E	G	L	E	E	Y	L	V	S	K	H	I	L	T
Template Known Secondary structure									T		S	S			S							S												S			S					S		S					T	T	S		B			S	G	G	G			S		B	S							T	T
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
		481	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	T
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		485	.