Job Description P25526 Confidence 35.82% Date Thu Jan 5 11:41:57 GMT 2012 Rank 52 Aligned Residues 236 % Identity 15% Template c3e5bB_ PDB info PDB header:lyase Chain: B: PDB Molecule:isocitrate lyase; PDBTitle: 2.4 a crystal structure of isocitrate lyase from brucella2 melitensis Resolution 2.37 Å

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		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.					.	.	.	.	.	.	230
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		P	W	N	F	P	A	A	M	I	T	R	K	A	G	P	A	L	A	A	G	C	T	M	V	L	K	P	A	S	Q	T	P	F	S	A	L	A	L	A	E	L	A	I	R	A	G	V	P	A	G	V	F	N	V	V	T	G	S	A	G	A	V	G	N	E	L	T	S	N	.	.	.	.	P	L	V	R	K	L	S
Query Conservation																																																																							.	.	.	.
Alig confidence																																										.	.	.	.					.	.	.	.	.																	.	.	.	.
Template Conservation																																										.	.	.	.					.	.	.	.	.
Template Sequence		E	I	K	Y	S	L	A	E	M	G	A	N	R	L	W	K	L	I	H	E	E	D	F	V	N	A	L	G	A	L	S	G	N	Q	A	M	Q	M	V	R	.	.	.	.	A	G	L	K	.	.	.	.	.	A	I	Y	L	S	G	W	Q	V	A	A	D	A	N	T	A	S	A	M	Y	P	D	Q	S	L	Y	P
Template Known Secondary structure																						S	S						B		S	S										.	.	.	.	T	T		S	.	.	.	.	.															T	T		S				S	S	S		S
Template Predicted Secondary structure																																										.	.	.	.					.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.						80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260							.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																.	.	.	.	.	.											.	.
Query SS confidence																																.	.	.	.	.	.											.	.
Query Sequence		F	T	G	S	T	E	I	G	R	Q	L	M	E	Q	C	A	K	D	I	K	K	V	S	L	E	L	G	G	N	A	.	.	.	.	.	.	P	F	I	V	F	D	D	A	D	L	.	.	D	K	A	V	E	G	A	L	A	S	K	F	R	N	A	G	Q	T	C	V	C	A	N	R	L	Y	V	Q	D	G	V	Y
Query Conservation																																.	.	.	.	.	.											.	.
Alig confidence																																.	.	.	.	.	.											.	.											.													.	.	.	.	.	.	.	.	.
Template Conservation																																																												.													.	.	.	.	.	.	.	.	.
Template Sequence		A	N	A	G	P	E	L	A	K	R	I	N	R	T	L	Q	R	A	D	Q	I	E	T	A	E	G	K	G	L	S	V	D	T	W	F	A	P	I	V	A	D	A	E	A	G	F	G	G	P	L	D	A	F	E	I	M	K	A	.	Y	I	E	A	G	A	A	G	V	H	F	E	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T																								T	S			S	S	S		S									T	T	T	T	S	S											.					T		S						.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																												.													.	.	.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		D	R	F	A	E	K	L	Q	Q	A	V	S	K	L	H	I	G	D	G	L	D	N	G	V	T	I	G	P	L	I	D	.	E	K	A	V	A	K	V	E	E	H	I	A	D	A	L	E	K	G	A	R	V	V	C	G	G	K	A	H	E	R	G	G	N	F	F	Q	P	T	I	L	V	D	V	P	A	N	A	K
Query Conservation																																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																																								.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	L	A	S	G	K	V	L	I	P	T	A	A	H	I	R	N	L	N	A	A	R	L	A	A	D	V	M	G	T	P	T	L	I	V	A	R	T	D	A	E	A	A	K	L	L	T	S	D	I	.	.	.	D	E	R	D	Q	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	B																												T											T	T	T					S				.	.	.	S	T	T	T	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.
Template SS confidence
																						177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.				.	.	230	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.					420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure																				.																					.	.	.	.
Query SS confidence																				.																					.	.	.	.
Query Sequence		V	S	K	E	E	T	F	G	P	L	A	P	L	F	R	F	K	D	.	E	A	D	V	I	A	Q	A	N	D	T	E	F	G	L	A	A	Y	F	Y	.	.	.	.	A	R	D	L	S	R	V	F	R	V	G	E	A	L
Query Conservation																				.																					.	.	.	.
Alig confidence																				.															.						.	.	.	.
Template Conservation																																			.
Template Sequence		F	V	D	Y	E	A	G	R	T	A	E	G	F	Y	Q	V	K	N	G	I	E	P	C	I	A	R	A	I	A	Y	A	P	Y	.	C	D	L	I	W	M	E	T	S	K	P	D	L	A	Q	A	R	R	F	A	E	A	V
Template Known Secondary structure		G	B		T	T	S		B		T	T	S				B			S												G	G	G	.		S							S	S
Template Predicted Secondary structure																																			.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions